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Human element [ hs2276 ]


Position: chr8:125,858,653-125,861,825 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: MTSS1 - LINC00964

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
gACCTCCATCTCCCAGGTTCAAAtgattctcctgcctcagcctccccagtagctgggact
acaggtgcatgccaccacaccaggctaatttttatatttttagtagagatgggttttcat
catgttggtcaggctggtctcaaacttctgatcttgtgatccacctgccttggcctccca
aagtgctgggattacaggcatgagccaccatgcccagcctaaatgtttttcaccaaattg
ttttataaatgtttggcactaaactgaccatgaaaaggacacttgtttgagagcatgaga
gcagaaacaggaaggcaaagtgtctccttgttggatctcagctggggatgggtgcattgg
gtgactcaaatcttttgcagctctgcatgtgtctgcaaatgaccttgaggtttaagtgat
gattttggagttataaatacattttagggattagacaaattcacacatacagaacctgca
aataatgaggatagactgtgcccacatacacgcacgttcaaattatatgaaatgctgtgg
aggaaaatagcagcatattttcaaagacaagagagaaccccttccttaggtggcacggtc
agggaggccacaaaaacggtggcatttcaagtcaaggcttaagggatagagaggaaccag
gagcacaggggagaggtttaccagcagaaggggcagctcgtacagtcccagtgggaggaa
ggacagctgcacttgcgaggtgaagtgggagtgtgaagaacaagacgggagaacaagtat
ggaatgcaagaggcaagtcaggcaagggcctgagtgggtcagggagagcctgggaagatc
ctgggtttggattcctttcaaggtgcaacgggaagctttggcgtgtgttgggcaggagag
tgaaatgtcctaggtagagttaaggttttctctagctgccccatggatttgccagggcag
ggtctgtttccctcagctggctcatctgagaaataaatgtgtgatactctcaaatccttc
tttggatttagagagaggtataagtaaatgccaagtcccatgttacggtgtggtaatact
tgtttggtccactcataatggcatttattttttaaatcagatctactgggactataatgc
ttcaaaccacgggagtaagccttgcatgtgaccacttcagcttccacagcaggaaaaggg
agggagatatttttagaagggagacctctcagtgccccctaaaccaggccggaggcactg
cctggccccagaggaccgttggccttgcctatcagctttcatcgtggaggaggcgtgggt
ggaccgaggtaccacaagttgccaggaatgcctgaccagaaactgctcttgggtgggtcc
cagagctgcctccccttcacttgaccctagggctgctggcttcctggccttgtgaaatct
tctagaggcaggaagaagcctgagcgctccctgacgccacttgagtttgacttcatgggt
ttgccgtgtgcccctgaacaaaccagttatcctctctatgccttatttcggtatgcccat
ctaacactaattaccacccctccctgactgcccccaaaccttaccagaagaaatggcatg
aagttacggagacactttgaactcattggcaaattgtgcactgtgaggggaaagcactgt
ggcggccattttcttttcttccttgagaaagtcccttgctaatcattaagactggctgag
taagcttgttcctttacatttggtgagtaagaaagcccctcatgctacctcatcatatgt
tcttcctctttttcatggcttatcaacactcccttctgtaggacatgctgaggaattagt
atgagtcaaaaggaagaatgacaaataggtggtatttctggtctggagtttggagggcaa
gttcagtccaaaagttagctgcttcaaccatcatgaaaggtacagaaactctaggatgaa
tacacttagtattttttattatttatttatttattttttagacggagtctcactctgtct
gtcccccaggctggagtgcagtagtgcaatctcggctcactgcaacccccacctcccggg
ttgaagcaattctcctgcttcagcctctcaagtagctgagattacagtacactttgtact
ttaatatgcaaactgcctgcctgctccagagaagcagcctttgttcctcagttcatcgca
acactcagcctgtcagtcaggttgtgggatccctcctatccaggaactgtatgctgttgt
cccggttctgacactttccctctgagtccttggacaccttacctaacctcttggaagctc
ctgtctgtgaagggtgtgcacagagagcttcggtagcctgcgaagcagccattttcactt
ccacggagcaggtattttattgcattatttcgagctcaaggactccagaattagatcccc
aaaatatgcctgagaaacatttactccccaggagctcaaactaaataatgaaaaccattg
aaaacaaccaggcagcccatgtcctgaagtcaccttttcctgggaggtccaggagagttt
ttcctactttccctgagttatccttccctttccttcccttccctttcttccccagagggc
gatgcatgttaatcaaggagcctgcatttgcgcaggtatagacaattacacatttactgg
gtcagttgcacctgggggggacgccaatctgtaaagcagaaccaaacctcttgccttcag
tcctcagaagttcttctggttaaaatcatctaaaaagttgtttcaagtctccagaacagc
tgagatcagcaaaaataaatgaagcttcttctgtgtgggtgcagatgctggcctgggtgc
tggaatatggaaatgaggaagatcctgcctgaggatttcatgacaggtgagggggagaga
ggcctgaggaagttaccaccggggaaggtgacaagtgcagtgataggataaatacgaagt
gcaaagagaagacagacaagaagttcagctagctaagaaatgtgttaataacaccttgat
caatcattcctccactttttttttcttttgagagtctcattctgtcaccccacccagagt
gcagtggcaggaacacaactcattgctacttcaACTTTCTGGGCTCAAGCGAT
Primer
(+)cacCTCCATCTCCCAGGTTCAAA
(+)ATCGCTTGAGCCCAGAAAGT


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