Human element [ hs2272 ]Position: chr1:11,847,301-11,852,413 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: MTHFR(intragenic) Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence TTGGAATGTCTTCAGCCACAtgggggaatgggtggaagaggccgggatgtgtcctgccag ctagagcagcgaagaaatcccagcggggccccaggaagtccaagcccatggggttcaggt gctcctctctggctattccttcagacccgcagctgctggacacaggccacagagctggtg cctcccgcgccatcactgcagtgcagcctgggtggacggaggaagccaaggggaacggcc tgggctcagagtaaggagaccttgccccgggggacaaacggtgtctgaagtgcaggggtg aagcggtctccagtcctcaggggcctggaaatcagctccttgggacacggtcttatgtgt attgaccattctccccatccattccctcttcggaatgtttcagctgttctgagaaaacac tttgcattcctgccccgcccctgtgatttctctttgggcggcaggcagccgggagaggct ggaggcctggggagatgggggcagggcacaaggctaagctcagcaccttcctccaccctc ctcactgtactcaactcctaggcgggcactaagagcagctgccttcctggacccacctta acctcttgtgactcaactcccctttccagggtgcagggaacattccctctgccctgcctt ccagctctggccacagtggcctggacagagtagctgggtcccaggcctgcccctgtggac gagggaccagggaccaagagcgcactccagccctgagcccagagcctgcaaagcccaaag caaggcccataaacggaggctacggtaagaggagctgtgtgtgcagtttggtgggtccga gggatgggggcaagggctgaggggcttgcctgagccatggctacagctgggccctctctg gccagtgctcgttcctgcaggatcctggaaaagcaggcccaggcccatggctctgccctc cttctggccctgaagggtcacgatgctcttggccatcaggaggaagtacctgcagcgccg gtgcctcgaggcactgcttcacgggctgcggggttcccagcaggccaggtgcctggcagt ggcatggcagcactgggtggatgcccaaggggcagagcagctggtgcggaccctggtgag tgggtgcacccctctccacactgaccatctcccatttcacctcatacttaacccaaaccc ctctcaaaagtatggcccttggacctactgactccaaaaccttgggggacaggcccagga atctgcattcttaatactcctcagatgacacccccttgccatagccctttcactctggtg cagcagtgtcgggggagaaaggcagaagggctggggactgcgggggagcgtgagcacaag aggccttctctgccaactgtccccaaagctcagggagtggcacctgagatgggcctggca gacgtggtggcagcggatcctgcgactgcgagtggctcagcagttacagcagcaggaaga tgggtgggtcctttcccaggtactgccctcttccctgcattccactcagccagccttcca gaagtctgtgccacagccacgcaccgtggagctttccctgcttgccagccccggggcccc ttcgttttcaggggagggggtcagttccattacagaacacacaggctggatgctggagcc cttgctttgatttgtggccccagctcaggccaggcccacccggtccatcagtttgcgaag aaggtgtggcatgaggcatggctgccactcacactagcccatggagggcctgggtcctga gcgccccctccctcatttgctctgctctgagtacagcttcccagctcaccatcagatcta ttctgagcttgtgcatttggcctaggcaagactggctggctgcttggggcagagggaggg gccctggggacaaaaggagctgggtacaggggttgctctagcaggcacagcacagacccc ggagaaagcccacaacaatagcatttcctctcctccctggttccaggcctttaagaagtg gcaccaacgcctggcagccaggagcccaaggagaggagctgccagtagcccaagaccctg gagcaagccaggccccaagggccccgagagtggacaggaagccgccagagcaccgcgggg ttgggggcttggggcagagcatggggcccagctgcagctgtgacttgttctcatagaata aaaaacagaactgaacttagccttcccagggaaggaaccatgccccacacatccagggag tgatgacagaggggacagcttgaagagctctgaaggacaataaaacccactcctcagtcc tagctgctgctttcagtctctcctagcggctgcccctctgccccagccagtgaggccagg aagggagtaaagaggacatcccacaattgcgtccacccccttggccatcaggctgctctt ccactacacgaaacagcccatctgcacctgccagtcactgcccccaggccctggggcttg caggtgactcgtggggagccaggccaggcagataacctctgggacaggacgaggggatga ggaaggcagctggcaggacaagggcctacctgaaaaatacaccaggaagctgggctgctg cacaggcccaggcagatctggggcccctgtgctggcaaatctcatcttagcctctgacag ggaacggggcagcatcaggcctccacagccaggcaaaaggggaaggccacgagccccacc aagcacaagggttcagactgccttcaacccttaaggggcactttttctctcaaggctcag aatagacaactgtgccaaaaagcagcatggtaggtgtcagcccaatgcccatccaggggg ctggtgccatggacggctaagtgggcaggcagggcagtggtgtgccccttcagtcacaag taggtggggcccagctgcccacctctaggaggtggaagggtacagcactttgccacatct cttctacgatgccaccagtgcctgatgcccttgcgtgttttgcctgtactgcacgggctc caagtgtaagttcactgggagtcccaggctggctctggaggctgccttggttcgagggct tagttggcaacaaccactctcctcgccttctcaggaggtgccacccactgtggtcctctg caggacgcaagtgctccccaccaaaagagcacagactcctggctagagcagagagtacta ggttcccatgtggggccgactcaggtccaggaagagcctggaagcctcactccagtctag ctgccattgtcaggtgggggagtggaggccggggtgggagagacacgaaggagagtggag ttcccaagagaagcagcactgtggaggaggaaggcgggacaggagtggctccaacgcagg gcgtcaggacgcagggtcatggagcctccgtttctctcgcattctgggtgggcctgttga gaagctccaatgtgtcttccaccacctgccagaggcagttgtccagtgggaagtcattgt ccaccaggttgaccaggaagtagttgtcgtggatgtactggatgatggtgcgggacgggg actcctcctcatacagctttccccaccgctcaatccacagggcaaaggcctcgtcctaca cacacatacccccgcacacacgcacacatgcacacacacacagaggcaagattaacaggg ctctccaagggctctgctcaacaggacatttcccggaatagaacaaggcccactgccagt atcacttcccacccctgcccagaaataaacaccctgcatcagcagtgacatgggtgagtc agagctgggtgtgccctgaaggctgggtccagtgtggccttcagcacacgcttgggactt ggtcccaatccctccccacggttttccaggtgggcggggcaagcttgcccccggctcctt taccttccagaacatgaagctgacgggatccactacggtgggctggatgatctctcgccc agggaagatgccccaagtgacagcattcggctgcagttcaggggcattggtgatgttttc accctgaggggatgtggggtgggggtaagacctgggccaagaacaactggagtcccactg cctggacagccttgactcaatgaggctgtctgggctcaataccctctgcctgcgcctcca ctcccggcctccactctccctgcgcctccactcccctctccctgtgcctccgctcctggc ctcctctgcctgcatctgtgaatgatatctctccccacacaagcctgaacctagaggcgt cctggccacttcccctctcctccttgagcaccccctgctcactctctgatccattccctc ttgtctagcccacctccaggagtgtgtttggcttgggtcactccaggggtctcttcactg gcctccccggctctagccgtccccaatctctctcatccgtatgactatccactgtgattt gcctaaaataaagcaggaaccaagccaccccactgctggagaaaggcttcccttgcattg agggaaaactcaaattccagcaggacaaccatgatctctgcgggcctggcccctgcttaa cactcccgcctcctcctgctcatgttccccgtttccccagatggtgcagctcactgcctc tgcctgtcctctgccctgtcccaggaatacccttctctcctgttggccaactcctctttg tcctcagtgattcccacagatgaccctctgagaagccttccctggcctcccaggtgagat atccctcctctggacccgacagcatcctctcctgaacttgattttcccacttacactggc tggtggtcacacattgatctgcctccctcactctaggctgggagctccttaagagcaggg ccccagttctgcctgtatctctctgtcttgcacaatgcctagcccaggctaggtgctggg tgtttgctcaacgaagggcctggtactctgtgggaaccctggggcctggcctaccttcac attgacaaggtggtaattaacccggagctcgtacttcttcagcacttgcagaAGTGCTTC CGCTGTCTCGcgGPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.