Human element [ hs2232 ]Position: chr3:156,845,778-156,849,158 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: LINC00881 - CCNL1 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence AGCCAGGAATAATGGTGACGgagaggaaagaggctctgtgtaatcttggggaaagtacac aatctgccagtacttcagtttcttcatctgtgaaattatagccttagctgtccctaaagt cccttccaaatctaagccctttgctccttttatcttttggcaaaataagcatttgaagaa atctggctatctcaagaaccccagctgatcttctaatgcacactgccaggcctccaccac ccccgggccaagagggagtctctgacagctgaattgtggaaacctctgggtgaggcaagc agccctttgctttctccaaggaacaaagaggcacgaggaaggcactggtgggaggcttgg ggtgagaggcctctccaccagggcaatgagttatcctgtccctttctactgactcaccac tgaaggccttgggcaattgtgccagccagaatcacagaagtggctgcgaactcagagata acagagtggtccagggaagccccagtggactgagtcatggccaggctctcacagccctct tctcgagtcagcatcgactccctgtgatctccctggagcctcagactctcagaagagcag gtctcagaacactggagatgaaaggaacctgagacaccatgtcataagccctgcccacca acctccctatcatgtgacttctcgggctggttgtgttttttttttccccagctactctga taaatcacattgtttggatggctgagctctgtctctggtctgactttaaaattaaggttc actttgcccctcaacgccatgggtccagctctcaggactcctccaggctacctttacctt ccatttttgaggtagtgtcatctaccagcaagagctctgagccataaatcaggaaaccag ggcttcctgcttctgtcctctgaccagacagaaatggagcattcaccaagtcacatcatc tctttgggactcatcagggtttgactgtgttttccccagagtcccttctagtaccaacag gagaggatcagatcatcctaaaagccctcttcaattctgaagtcagtcatcctctatcag agttcctgaacacagccaggctggttctgccggggatagccgtggcttgtgactgccatg cctctcctcctcccaggaaggtacagaatccacagcctcaggaatgccaggcattctgcc aagggcgcccttccttttctcggtctggtttctcagtctctctcttcccaatctagacta gactgtcacctccactcaccaatcccgtggaggggtcaggggtgggacggaggagagcca gaaacgatgaactgcgactctactcctcatctgtgtggcaggcctgtcattcctcctcca gtcgggcctgcctaactagaccagcactggggtcactctgcgtgtgagtggggagggatt cctgcctatccagtgaccctgcttagtgggtggatgccacctctgtccctggagcacccg aagcacccaggggcccccacctacctgtttcacttctccagggcttccgtgtaaggccac ctcccccacctcaggcctggcccctctttgctaaggactgcttatccccaggatgttttt ggcaccttctgggccacaaaggtgcttcctgtaaaagaacaaaccgccccaggttgcctt ttgacacatctatttcagggtcagttggcatcttatgtttcgcctaaaaaactgaacaat cttttttctctcatccagtaagaaaagtcttttttttattttcacatgggtttatgcacc ccctgccccccaccttttcagaaggaggctcaatgcaagtatctgtgttataaactagct tcctacactggccctgcccctgcgcggacttagccttcctaagaaggggctccttttctc ctggcatgtgctcggctgctggagagaaaggcctattgttcttcatgtgcccagtacact cagccaggcaacacgctgggtgttcctcccaggaggtagaaaaccgcctccccaagatcg gatcattttataccttgtgttttgtttggttttgtttctggcctttccttctttgctgta cctccttcccgagcgctcagagcccatagagcacttatttctttccgttccctttgcaca gtgaattgccttttgtatgcctttgatgtgattgctcagcttccaagggaggggaacgag tgtctcgtctctcccacctagaggctcgtgctgcctgtggtcaggaagagagcgaacaaa ggcgtgcttggccccgagggaggctggggtagggcccacgcgtggaatgtagggtctctt ctgcccagaggtggaaagtcgagcagtgctttggggtctgcggggctctccagcgatgat ttggggtgctcatggcagggctgagctgggcaacaatatgaggagaggttttgcttcttg gtccctgtcccatctgcttagagtatccgggttgtctggggctccgagggaggagcacta cagcaggagccaggaattcgcctgcctctgccaccgtgtgaccccgcatgacactgaccc tcccagggggagcctccctttcctggcccttgagtggggcaataactcctgccccacccg ctggctttctgggtctcatgtggtgaggagcaaacacgacactctctgaggaaacgcggt gagaagcaagagccctttgtgagtcagaggtggtggctgttgctgtctttcccactgttt accaggcgccccccacccaatttcccgtgagcatctagtgaccccatgctacccccttgt ggccaaaatgcgactcatcattcattgctgtgaaattaccttgctattaaaatcgtaagg aaaaataaataatgaaagtaattaataataatgaatatatagtaattaacccagactgga atacctttacttttcatcaataaatccataaaatataatttttaatactttttgatggag gaaatggcgcatgaagaaaaaagtgcttaatgtgggcccagacccaaggtgagcgtggga ctgagggcgcccttcccggctactacccagctgctggcggcgccagggaggcctgcccga ggccagacggtggccacttgccgaggctcccctaaaaggtcctatatgtccccaagatga tggggccaggatgaggaacaggtgagaaagcacttggccgctcttcctcagctctttaaa atcttttcaggtccctcaagattacaaaacactttaatagctatctttttctttactgag atagaaccggttgtctggaggcaaattagagctcctgcatgttgaaaaataagtgaCCAA TAACTGCGTGTTTCCTCGtTaPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.