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Human element [ hs2225 ]


Position: chr20:31,112,334-31,117,114 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC101929698 - LOC149950

Timepoints:
e11.5

Expression Pattern
dorsal root ganglion (7 out of 9 embryos) 
forebrain (7 out of 9 embryos) 
hindbrain (rhombencephalon) (7 out of 9 embryos) 
midbrain (mesencephalon) (7 out of 9 embryos) 
trigeminal V (ganglion, cranial) (7 out of 9 embryos) 

Embryo 1

Embryo 4

Embryo 5

Embryo 6

Embryo 7

Fasta sequence
TCCTAGGCCTGGAAAAATCCagaggggccctgtgccctagagactgtcaggcagtctgag
gattcagcgttggcaaaacacagagatagatccaaaaagtcctcagccaggagcttgatg
cgtaccccgtgatgccaggctgtgcccctctgcagccatcagcaggggtttccttggggg
ctccttccacaggcatggatgggtgggggcctcgtgtctgcagagtggggctgaagagct
aggtatgggtcgaggaaaatgggagcagatgaagaggggcacaaaggcatccaggcacca
ccccctgcccccaaaaaaggaaaagggtggcatgagaagggtgacagatggggaggagaa
ggggaaaaggagaggaggcacgtaggggaggagggaggtgtgccagccccttcggcctca
cacccacggcaggagggccctggcctgctcagctcagccttggccctgctgctgaaattc
cagctctgtgtgcagctcagctggctcagtgccagtcatgtgccagctccaggctgggca
gcgggaagtggggcacgcggcaggcatatggacgagaagccaggaagtgcagagcaaagg
gctggatgtccgcttggcccagggatgcaagtgctggcagaaccagctcagccctgccct
ccccacagcatggaggccgcagacccctgccttcctaaaccgcccaaagagtgcctgtgg
acgaggcttgatgctggacaccgaaggggccagggaaaccacatgatccagctggctcca
gcccatccgcctggacaacagcaagtcatagggcttactagctgaccacaggagggttgc
agagaggcaggatgtgtggtggtcagggcacaggctctggggtgggtggcctggctctga
atgtcagctgactgacctcaggcaggttatgtgtttctctgagtctcagttttctcatct
taaaatggaggtaacaacagcacctgcttcatgcatgcaaccttcatacatgtgtaggaa
gtgctggtgtagagcacatgctgactgctcagcacaatggtgaattttatttatttcttt
ttgagacagggtcttgctctgtcacccaggctggagtgcagtagtacaatcatagctcac
tgcagcctcaagcaatcctcctgcctcagcctcccaatcagctaggactacaggcacaca
ccactaggcctgaattttttaatatattttttatttttatttttggagacagagtctcac
tctgtcaccctggctgaagtgcagtggcatgatcccagctcactgcaacctctgtttcct
gggctcaagtgattctcatgcctcagcctcccaagtagctgggattataggcatgcgcca
ccatgcccagctaatttttgtatttttaatagaggtagggttttgccatgttggccaggc
tggtctcacactcctggcttcaagtgatctgcctgtctcggcctcccaaagtgctgggat
tacaagcatgagccaccacgcctggccccaatttttttttttaagagaaggggtcttgct
atggtgcccaggttggtcttgaacttccagctcaaacaatcctcccatctcaaccttcca
aagcgctgggattataggtgtcaaccaccatgccccacccacaatggtaaatttaatgct
gagaaaatgtggtcttgtcagtgccaaggggcccatgtgggccccagcctgggtgcctct
tccttcttctatgatcctctggtggaaataccctcagaactcccttcccacaagtcactt
cccaaagcacacagaccgagaagcaggaggggcggggagaccatcaccatctcctgcctt
cctgggcagacaccttgcctctctgaggctcttggcacatgggtccatccttaaaatcca
tttagggcaaaagccattttctgaggacaaggactaaccggatggttgcattaaaaaaaa
aaaaaaaaagatgggccataaggggaaattatagactttacagccacctccacggtagtc
caaagctatttatacaaagaacttggggtgggaagtttcacatctgccttgggtggggaa
gcccagccacagaagggcatatctctagaagctccagagaaagtcggcatggaggacact
ggctgactgcaactcagctgccgtctgaccttggacaagtgacccaattctctgggtccc
agtttccttaactgtgaaatgggtcctcagtgcctcggtcacaggactgcatcaaggctt
gaatgagcatgaagggcttggctttactggcttccctgggcactggacaaatggttcaga
gctatgtatgagctgtggataggcccacatgtgggtcagcaggagatggatcagaacaca
ggcaggcccctctgcagggtgaggaggggcctctggtctggccagtcccatctatttcca
cctccctggcatttgtgatgcttcctgcccctaggttgccttttttgcccttatgcctcc
ccaaagcgtagaatgccagtacaggtgtcaccttctccacacagtcccccgggctcatct
gtgtctggcggtgcctgtgctaaatgcccctgagcctgggttcttgctctctcaaagcga
gccttggagacatttctgcttctcatgtatcttgtttttgctctcagcctccccacccca
aatccaattgtgatctcctggagggtggggagcaggtccttcgacttcccctggggaact
cccagtcctgacttcacaggatgagctcacacataggaagagctcaggacaggcctggca
tgcagtaaatgccatgccatgaaggcatttgctcctctgattattatctgtccccagcac
cccagccccagaacaggctgcaaggggctgggggtggtgtcgggtgggagcaagtgaagc
agaaacggggaagaggagggcgcctcctgccctcatccctctccttccctccctctcacc
cccttcaacctgcttttcctttgtgctcagaccacagattccctcccctcgccctgtgag
ccatctctggctgccgtgcccttgccctgtgcccccctagatccccaaaggccgtttcat
cacgcctcagctccctgccccgccccccaagcccaacatgtgcggagcccgtggcctcct
gccaaggcctggggctgccagtggaggcaaagagacagaaatctcaccgctcggtaggtt
ttcttctgcccagcgtgcttgggggctttgcctggctccgctgagctctccacatgcatc
gagtagatgatgtcaaagaaatcttccaccacagcgacccgcttcagagagatgccctct
ggctccgacaggccatctgccccctgcgacagggtggacaagctgtgttagtgtcaggaa
tgatggcggggtgagaactgggccctgaggccggggcaaggggtcaggacgggcaatgcc
tccgacagtgggtcttggggtggggaggggagggagcctaccgagggggctccctggagg
gggacgccagagtcagggtggctgcagctatgaaatctaccagcaacaatgggcagagaa
cggcgacaacgaaaatacaaattaaaaaaccaagaggctccatgttcacaatttcagaca
gattgtgccagactcgggcggggagctcttgaatcacacgctgtgccaagaccatcctgg
aagtctctggggaggggggagtgctaaatagatgcggccccatcaggagctcgccaatta
gcagtaacctttcactgtgggcctgggctggggtcccgggggaacagctccgatcacctg
ggtgactcctgcctccgccctggcctttctgaaaagcttttcgcggctgcctgccctccc
cactccagcagctgagcgccagcaacggcacccgggccctttgtgtgtggagatgtacag
aataacaggcacgaggccacgaggaggtggcagggccgtgtgaacggggcggccgtgggc
cccgagcctcttatcaggctggctgagtggtgtcagctggcccgactaggtgtgccagga
gcaagacgggtccttcaatagcaaacagctgtggggctgacgcctgccctcccctccagc
aggaaagggggctgcagggaaaccacagggcaggaggctgggggtgaggccagggcccgg
aagggaacggactgctggggaactgctccgtgcaggcagtcctcacaagggagatacaca
gacccagagacactaggctgtcagccaccagctccttcaggggagtctgtggggacgtta
gggggctttgaagatcaagagcaagccatatggagggaatttgaggggaaaggaagcagg
cttttctctaaaagtgcccaaaagacacatctccaagagaattcttccccaaaggacccc
aactcaaggatgtcagcaacaagaggatgtgggcttcgcctgctccttctcagctctctc
cagcacttacaacagtgcctgacacatagtaggtagtcagtaaataatgactgaatgact
gagtggtcataagtggcagctgggcagggtcacttggacacactctgccatggtttgaat
acggccccatcatggaagtggccctgtgaccccgagcacttactgtgcttcgagcttcag
gccctttatctgtaaaatggggataacagaagcccctttcccatgaagaactgagttgtg
tgtgcagcacttggcacTGAGCCTGGAGTACAGGGATtGct
Primer
(+)TCCTAGGCCTGGAAAAATCC
(+)caccATCCCTGTACTCCAGGCTCA


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