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Human element [ hs2211 ]


Position: chr16:58,528,894-58,531,192 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: NDRG4(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TGCAGACACAGACTGGAAGGtaggtcaaggctcagacccccaagatgtgggactgacagc
tggcagcccctcaccccacctggccaggtcccagaggagggtcacagcccttctgtgtgc
cccctgcctaacagagagatgctggggtgggagatgaactggccctgcttctgcgagcag
cagggaagagacggggcctctagggggagtgagaatggaaaagagagtgagggatgttgt
catctgaatcagcattttcctccaatgaaaggcaggttgactctaaaatagctcctgttt
ccatgacagctgttgccaggacaaccctgtcctccttagttgatgccaggttctccgtgg
aaactgaaagcgccctttgtttttattcctccgggtgatgatgttgctcactcggccagt
cgtttctcccctctgagtcccacagtgaccattgatttccgggtctgggaaaatgcctga
cagcagacacaagggaaccctgctgggttctggggccccactggccatcccgacatgctg
aaccaattcagacccttcctcctggtaaggtggaagcagctcccgagtctctgtccttgc
ctgggcctgacctggttttgggtcagcctccaagccccgtgacagcaccagccaagtggt
ctggatgcaggggtgacacggaggcggggctgccctttggctcgtcccccagtgggagca
acgcgaggatcagtgtgagaatctgggcctgtgtgctggtccctcggtcacgcgccactt
caaggacgagaggggagacttcagggcagccaatgtacatgtgctcagatcctccgggaa
tgccatctccaagcacaaagggctctggagctggaaggagaggctagggttccggcagtg
gggagtgaatgggagcccaggaggtgggatgggagggaagtggtcgggagctggcccagg
ctggtgggaagggacagccggagatcagggcaggctcaccaggggattttctttgtcctc
catgctgcaaatgaggatgagctatgcaggcaaatgggccctggaggagggggttggcca
agtaaaatctcagagcagccagccggtgcctcaacacactggtcccacagtgtgggaggc
cgacgccaacagtgctgatgccagccccagcacacaggcccacggtgtgggggacaggca
gaggggaatcctggagtcgtggaggagaccctaccatacctctgggttcccaactgctgc
tgcgaagctgcctctggcccctgagccctctgagctgcagccccggagttgcggggccca
gggtgtgtgggaccccggttctcaggatcctctgcttggtaaaaggcaggttgcattaaa
aggcaccttcctgtccactcctgtcacaccacatggaggcagcatttttttcgttttttg
ttttagaaaagcagccacaagaatggatggtcgttatctgggccaagacctggcagggat
tttatctcctgctcactatggcaggcgttgtcactgtcccctgcctccgtgggggcagcc
agtgggggaggtagtatagcagagggactaacatgagccagacagacctaggttctggcc
ccgccacttccaagcatgtgacctccagcccaagtcactccatttgtctaccgcattttc
agggagacaggcagcacggacctcccgagtgtttctaaggcgatggtgcccatgggcccc
tcatatggacactcagctgaccgtgacgagtggccaccagagtgtggagttagcaccaaa
ctgcctgggtgtggttcctggctctgtgcccactagctgtgtgatgttaggcaggttacc
aaacctccctgtgctttatttgcctcatttgtaaagagggtattaagagagaaaatgagt
gctcgccccagcagcacatataccaaaattggaatgatacagagaagatgagcacgaccc
ctgtacaagaatgacccacatattcgtgaagccttccatacttaaaaatattttccaaaa
agaggataaaggctgggtgtggtgactcatacctgtaatctcagcactttcggaggctga
ggcaggtgcatcacttgaggtcaggagtttgaggccagccttgccaatatagtgaaaccc
catctctactaaaaatacaataattagccaggtgtggtggcaggcgctggtagtcccagc
tacttgggaggctgaggcaggagaatggcttgaacccgggaggcggaggtTGCAGTGAGC
AGAGATTGCACCATTGCAC
Primer
(+)TGCAGACACAGACTGGAAGG
(+)GtgcaatggtgcaatctctgctcactGCA


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