Human element [ hs2198 ]Position: chr7:151,439,778-151,443,512 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: PRKAG2 - PRKAG2-AS1 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence CCAGACGAGTCAGGAGGCTAcaacaagctgacctgccttgtgggtacaccgtactctgga agcacaaagccggctgcttcctccccgaggccacttctaggtggctgagcacagaggtgg ggcacaaaaaactcctcactgctggggtctttctgtttgactcacacatgcctgaaattc cttacatgagggacaaagctttggatcccacgattagagatgaacgctgatgcgttggga gagatggcgccttcccattgcagggcaggggctgaggacccttcttcagcatacgtgggc gggggaaagttgaccactcacaggcggatggggacaccaaaccttcccctcttctgtttc cgccagtcgatgatcccacatgaatagaggggaaactccctgccacaactgtgaccctgc tcagagttccttctaacagaatgcttttcacactcagaattcttttttaaagggaggggc tgaaaaaggaaggaaagaatggctcccaaataggaaccgtattttctaatgtatttttaa agggccagggcctttttggatcacagtttaaaactcacacccctggctggtgctgcaacc caaagcctggcacgggaccaggtaattcgggtggcagatgcctttatctcttagcagtgc cccgtgctgtgtggccaaggcttccaggtcaccattctgacactaggtttataagatctg ggagggagtgaaatcagagctcagctcattcaacgtgtgttctttacgtgtgtcttctgg tggctgttcttttagatttctgactacaaacctacctttgacaactcgaaaaagaaaaca gtgtggaagaatactaccacaaggcatttcatactgttagcatgcttcattgttttctgg cttttggtttaattttctccccagctagactgaaagctccccgatgacaggtatctcacc cgcagaagaaagaaaaggagcgattactgagttcctccacgagactcaggagcagcatga tgggtcagggaacagcaagccagctgctgctccatgctcggcatccctgggagcagcatg tcctgttcctggaggacgcttttgtggctgttctggagccagggaggctgtgctgactgc tcctctgccctcggcagggctccaggcttggccagccagggctgggctgcgggaggccat ggcactaggtcccgttcactctaatacttggattttaccaggtgtgccagcccccccaca tctggatgctgcaaaacattccacagccagactgtgcactacacagcagagctgggggcg agagagatgaggaaggagaggtcaggggaactgcagatgggctcgaagatggagcacggt cacccctgcttcctgcacatgaggataagtggcgtgaaggcgaccacccttccacaagag acacaatggcgctcctgtggctctgatatgtaacccccacccccagactccggtgaccca aaacatgcgagtaaaccctttaattgctggaggttctcagccggtgccccggggccacgt tcccacggcatcggggaagtgccaggacatgtggcacatgttgtcccactaacgtggtgc tggtccaggctgcaggttggagccccaccccagccttatcgcctggtgaatgggactctg ggtctccgttgtagacaccatggttggtgcctagcctccacttgtcccccaccccaccac tgcagtgggcatctgagagccgagggcgtcatcaggccgagctgcctcctactccaggta gcctgtgaatacctacaggatcaagccccttgaagcccaccctatctctggacttccaat tatatcaaaaccaaatttttgaaaagaccccaagctttccgtctcatcaaagccactttg catgttatgtgaagctgcaaatagtctccttgaagctgtcactggggacccatatgagag aaaagtcactgagactccgtgtaaccaccctccctccatgcgcctccattcattcatgag actggcacttcccagggcagggctgctgaggcctgggagcaccgcgcaggcagaatcagc ccggccgaccgagagatccaccagcagagcagggcagggggaaccctagtcacccacacc ctgcggctgtacagagctgggagactttgcccgcagcagtttcctacattcttctcaacc atgctgtgtggtagggaggccagccatgactattcagttcaagaaataacatttttcaaa aacccagaagttcagaggtgctcagtgatttgcccaggatccgtgggcagcttgtgggat tgtgggggtcgacactggctctgctggttcctcatcagggggccatcaagagccaggctg cctctgctccatgggtggacggctgcagaagcaggtgaggatgcactactcaaaaacttc ccgctcatcctgaacctttgcggatcacgaggccatacctgcaaagcacccagtcccctg cacggctgcgttccaaaccacatctcattatgcaagagggcacgggtcccctccgcgccg gggagcagcaacacgccttagcacatatttgccagagctctcctgccggttgcaaaatac tgtgtcatgtttcatggaaagttctaaaggtcactgctgcacttgactctgagatcgcca cgtcgcctcactggggcctccacgccctgccccaggaggtgtttatgagctggcacctct gcggagcaccctctgccctgactcaagcccccacgcctctgttccacgtcagcccgacac actcatggtcatgcacagcctcgtggtgaccacaggaactggagcctgagtctctgagtg acaagagggtgatttttttggcagagacaaaccacctcagctcacacagctccactcaca ccagcgatatctaaggccactgagaactggcagaggcaacaggggcatcttgattttaaa aacacagagaagtactaaaaaggtgaaaaacgatagcaataattatttttagcatgccga aatgcagcacccaaagagtaagaaatccctggatctccttaaaatctggaaggggcatcg cattcccccatggagggctcggtggggcccttttcagtcccttctcgtggtgcctggcaa ccctgcagtcgctcagtgtccaagagcacaccaggccaagagctctgagggctccagcgg caagaacctgccctgattccagctgctccgtggcgcagaagctgagcgctgggctcaacg ggggccaccaagcaatggcttctgaaaaccagattctgaaactctgcaggccagccattt gggttttctgtttaattctctttaagtgatttaattctcttacaagtgctgaagtgagct gggaatgcaccgaagccttggagaaggacccggttaactcccggactcagcggaaagcca gtttggcctgtggtctctcacttctaggcgatggggcaggatttccagtgtctggacctg ggctggtcacagagcaatccacctcctcctgcacgtcactccttaagaagcccctagctt agattatgagggctgagctgaagtttgcctcagatctctttcttcttatagtgaaatata tttcaaaacaaggtaacaggtagaaaggtttaaaacacttaggtcagagaacctTAAAGC AACACAGGTTCACCCPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.