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Human element [ hs2162 ]


Position: chr17:37,815,763-37,818,960 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: STARD3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGATCTTGGCCCAGGAAGAGaactggaagtttgagaagaataatgtaagaagccctctcc
cacctgaccttcccatgcgtgttaggagtttctgttctcttttctgaggcctgaggaaga
aacccaaagattacatgggttggagccatattcctgccccaagagagggagctgggccct
cgggtcggcaggaggctgggctggattggacgtttcccccgtgccccttggccccccttc
cccgcaccccccatgtttacttccctgctgttctgcccccttggctccaggctttgaagg
ggaagccaggcttctgctctgcatccgttgtttcgtttcatgatcaaaacaacattatct
acaaagatcgtagagagcttggaaaacagagagcaacatgccccagtccctctctctggc
cagttcttgtggcagccccattggcctggagacatggttttttgtggttgcagctgcagc
tgtccccccgtcttttaactcgacatcaaaagcctctctcctgccagtgccataggtttg
ttagagctactgttttgtaacagctgctcaggtgtccccaaactcctggagttttccacc
ctgagctgttaaaaacctgccctgcctgtcacccatttctgtgccaccagcccaccccct
gcctccactctcctccctgccaccttctgtccctgccataggaatatggggacaccgtgt
acaccattgaagttccctttcacggcaagacgtttatcctgaaggtgagtgaggggagcg
ggtgtcctggagccccagacagcacaggaggctccaggaaggtgccgaggggccctctgg
tgggtgccccccaccaagagggaagggttggtctgcccgagcccatctggcaccacccag
ccctctgccgccctgtcccagaccttcctgccctgtcctgcggagctcgtgtaccaggag
gtgatcctgcagcccgagaggatggtgctgtggaacaagacagtgactgcctgccaggtg
agcccagtctggctgcctcttaaggcacagatgggggcacagccacgcctcagtgggatc
actgaagcactcagcgcctcagctgccccatctgtacagtgggtgtgatggtaacagtgc
ctgctcgggagggtcgggaggagggcaggaggagtgctcatcaggcgctgcccagggcct
gcctgtggcaatagcagttagtaaaggggcctggggtgttcccatccctggggttttcct
ggggcgacctgttccaaaagtctccgttgacggccctcagatcctgcagcgagtggaaga
caacaccctcatctcctatgacgtgtctgcaggggctgcgggcggcgtggtctccccaag
gtgagtccatgccgggccccctcctttcagccaggtcttctgcactttggccttgggtca
ttgtcccctgaactaaccctccctcccgcagggacttcgtgaatgtccggcgcattgagc
ggcgcagggaccgatacttgtcatcagggatcgccacctcacacagtgccaagcccccga
cgcacaaatatgtccggtgagcctcactttgcctggggtcacccctgccagcccctcccc
tgggagcattgagcagtgcagggtacagcatgtacagctgggcacttcccctgctgaggc
tgcgttcctgttccctgtcccgctgggctctgctcctcctggctactaatcctgctaatc
ttgctgctctgtctgtggagatggggggtggtggacagctggaaccaagccaccaaggct
ggacgggatgtgcggcggtggctggctggggtagaccatggatggggacccgtgcaggga
aggggcctgagagccatgtgctcactctgggctgattgacctgagcaggaggctctatgc
tctgggtttcatcttcctgcctaaggagactcgggtcccctttcgtcctcctcaccctgt
cctcactccgtcatctttctctggagtggctcaggagttcccccaaagataaagggatta
tggccttcccgcatctgtgcctgggcttctggagtcttcccttttgtccagtcaggctgt
ggtgctgcgggtggccccctcccatagaccccactcttccccatcccctcctgggttcca
gcaggagcactgttctttgaataggatgccaggctctgctttgggcactggacagacttg
ctgggtgcagggaagctcacttcctctctggatgccaacttccttatctgcagaatgggc
ttaggtgtgctcagtggagctgagggagaatgaaatggtgatgggatgtgaaccgtgcct
cccaggcttagccttctcctgagcaggtgtcccctcctgaaggggaaggggtaagaagcg
ccagcccagcctactctgccatagcagggctgacctagaatctctggacagagtgtatga
gggctgggaaggtggtgagctctctgtccctgggggtgtgcaagcaccaacaggccgttg
taggaggattcaagcatcacagagtgggtgggggtggagggccgattctgcagcccatgg
gacacctgtgctaagccttgttcagatagggtagctctgcctttctgcttccagcccagt
cccagctgggccaagaatggagtgtgagtggtaggggctgcgggggggtgtcagggcctc
actctgttccaaagtccccccaatgatgcctctttccataggggagagaatggccctggg
ggcttcatcgtgctcaagtcggccagtaacccccgtgtttgcacctttgtctggattctt
aatacagatctcaaggtggggtgctggggggctgccaggtgggttctgtggagtggaggg
gaccctgctgctgacttggttgctgcatgactttgggggctctctgccatgcctgggcct
cccctttgtcagccacctttcttacttgaaaatttgggtcagggtccagatggtctctta
gccctgggttgctgtagggcatgtgcccccccttcttacctctgagtcctgaggccctga
ggaagggtggctggtggccagcccggccccaccctggtctgtttgtgttgctggtgccaa
gagccaggcccagcatgttcttcctgccaggggtgagtgggagagggcgacccaggctgG
ATTCCAGAGCTGCACCTG
Primer
(+)AGATCTTGGCCCAGGAAGAG
(+)CAGGTGCAGCTCTGGAATC


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