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Human element [ hs216 ]


Position: chr6:51,076,205-51,077,209 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TFAP2B - PKHD1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ttagGTGTCCAGAACCGATTGACCcagtgttctgtaagatcagccttttctgtatctctc
taaattttagggggagggaatttttctcattagtaacagagatatgtagaaaatacaata
ttcaagcttagatttatcagaagataattcaaattatctcacttaacagattctggatct
gtttaaattcactgaaaatctggatcaaatactagcttttctattacagagatatcaaat
ttcggatatgcttcattatgactcaatttcttggcacatgctaaaaagcaccccagtaat
ccagtgcaaatgaatgtagaacatatcacagaccctgctttgggtcagaatgtccccacc
tcctctctacctgctcactctatttttttcgcctgaataggatacaccccaatattgata
ttcagtacggatactgagcatgtaatttattatgtcaaactgaaaaatgcctgtggtgat
acaagtttttatagctgtggttttctctagttcaaattgctttgagtatctatgtgttgg
cagaaagttcgaagtaggatggatacagaaaccatgagtggacaaaagacacctttagaa
actacaaaccagcaaccagaaagccttttagctgtaagtcagcagacttttatgtcaagc
ttggctgactaattattgcttataatttgcattaggattaattaactaattagagaggaa
tgtctgaaggcaaagttatggctctgcttgtcaagctgaggactttaattattctgatat
ttttaattataatcagctgctgaatgagtattacattgtcagctactatcgctgaaacta
ggctgggcaaaggggctggaggaattatggggacttgcggctgttcttcctactagcaag
ggaaaggtatggcccagccacccggaggaagaaaatcttccaagagcaagtctttaaaag
tgcacacagaactgggtaaaccacaACAATTCAGGTTGGTTTGCC
Primer
(+)CACCGTGTCCAGAACCGATTGACC
(+)GGCAAACCAACCTGAATTGT


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