Mouse element [ mm2159 ]Position: chr9:63,783,190-63,787,805 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: Smad3 - Smad6 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence CGCAGCTCAGGGCATAAAACcctggattgatccacatgaatggagtgtggtgtcgcacac ctctaattccagcactcaggaggtggagggaagagggtattaaagttcaaggtcattctc agctacatagggagtttgagaccggcctggaagacatgagaccctgtgtgaaaaaataaa gtctaaacaaggcagaaggttcctatctgtgaacttggaaaaaaactagaacagcttgtg tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtttgtgtgtgtgcatgtgtgtgggtg tttgtttgtatgtgtatgtggttttgtgtgtgtgtgtgtggttttgtgtgtgtgcatttg tatgtatgtgtatatgtatgtgtgcatgtgtatgtttgtgtgtgtgcttgtgtgtatgtg tatatgtatgtgtgtgtttgtgtgtatgtgtgtatgagtgtgtttgtatgtgtgtttgag tgtgtttatgtgcatacatgcttgtgaagctcaagtgcacttgtcttaatccaagtttga tatttattccagatgaaacattagacttacagctaagaatatctcgaagccataactgtc attgtcattgctacagcagctgagcagcagaaggaagcagacacatggagtcgccagcat acttgggagctggggctagccccagccttcactcctgcagccctcttcttatcttctccc catctcacaccttttcttcctttcctggcatcgccacagtccccacctggaccagcctag gtctatgagaccctgagggagtccttcgtgttaatcgtacagtctctgcaggtgtgaagg tcaaaatgatcagcccgcttttctggaatgtgcttggtttgtttcatggccttgatgctc tctgtgatactgccaccactgtcccctacaggtgaaccttcagctaagcccagtttgcct ctggaatgaatccagtcacagataagctatttgcccaatcacctacagcgcttcctctgt gagcttctggctggcgttggattcttccatgtacagtcttggccagctcagtcttgatct cttgccagtcctccctgtgtcctgcatggccccctcagctgcagttcctccttctcctta gggactcctgccgcctctgcttagaacacacacaagcatcactgagatgtcaccttcctt tttcggtcccttcttcttcctttaggatcacggagggcagggtccttcagatatgcttac agatcacctcccaggggcagcttctgccattgggagggtgtctgcagttccctctttaga ggctctctctgggtggcctcctgcagttgggactccagtttcatcctgctagccacctca cgttaccctcaacctggctcctgttcaccgtggctctcctcagcagcccctgaaatgttc tgaatgtgaacgtgagctagcgggcaggccagaaggttaggaagtgagaggtttaggaca gcaaggacagtactgtgggcacctcccagtgtgggtgaacagctagccagtacgtcagat gtccctgtggcaccagcgtggcccactgatgggctgagtagaattcttagactttcaggc tgttccctgttccctcatcagtccccttgataccttacctttatggcccttggtttcatg cagagctagaagcacagggaactggcggtgccgatgacccaaagcttcatggcttacaca gtaccctcgctatggccctcagccgcgctgtttaagatcagccaggggccagctcgttct ccaacaccttggaaaaaacgcaggctttcctcattgctgcctccacccttcttgaaccct ctggggaaacaaggaaaagccttgagcagcactcctcctgcctgccttgttcttaccagg caacgcctcgcagtgccctgtgggaacccaaccagctccccggttcaggtatcctctgca gcctctctctcctcttcagctggctctcaatctgtgaagacagcgtggtgagggagcaca ggcagaggtgacgacaagatcatccctgccacagaggccaagggcagggccacaggacag cgccctccattcctggtggccatggaggatctctgctttgccatcctggtgtccacagga ggaggaggaagctgctgaaaacttcagcaccccctcctttggggacctggccctgagagt cttttcctccagcgttttgatctggttggtgttcatatagcccaccagtgttacactgcc ctctgggatggtgtgaacaggcagacactcagcagtgaatagtgccatagcaagataatg ccacgtgcctcctgtggctgtctctccctttgctccctacctttgcttccttagagtccc tgtggctccggagcctgctgacagagagcagctgacagtaaatagttcccagtgtaggct cagctttcaggccctgcgctggtggctgggtagtggctgtcactgggtataaacatcttt ctgcaggaagacagaggaaaggtaaaggctcacctccaaccctgagccccaggggcgtga tgctgttgtctctgtaactcgaacccagagccttccacacgctaagcaaacctctatggc caggtccgaccccaggctctcccttttctttgtgtttgtggcagggttcctggtaagtgc tcaagctggcctgaaacttgttcgacagtacaggcaggccttgaacttgggctcctcctg tataaatatacaggcttctcccactagcaatgtcttcaaagcttccatgtcctctattct ttgcacacagttatgttcgtatctaattctttcttttttaatatctgcctgggcgtgtat gtctacctgtttgtggtgaggtagaaggtcagaggtcagccacatatgtcaggatgccat ctgtgttctagttttacaagccagggcctttcactgtctggaactggcttactcgggtct ggctgtatttgctggccatggagctctaggaggtcttgtctctccattcctggcttataa gagtttgtaaccacactaaacttttaaaagttattttaacttttcattagtatgtatgta tatctatacgtgtgtgtgcatgtatgtacctactatgtgtgagtatgtataatgtgtgta tgtgtgcgtgcgtgtgcgtagcacttcataccacacatttctgtggaagtcaaaggacgt ctctttgtatttggttctcgccttctcctgtgaaccctgagagttgaacctaagttgcca gacttgctgctgcaagcccctctacctgttgcactcaccagcacatttttttttttttaa tgtcaggtttgagggattgaactcaggtcttttgtgcttgcctggcaaacgcttgactaa ctgagctatctccccagtcctttcccctcaatcttctctttcatgtaaggtctcaataca aaggccaagctagttctgaaattcctctgatccttctgcgtctgcctctccagtgcctgg agtccagtcatggtaccatgcaaggcttactccatatttcttgaatttgagtgtgcacaa actctacatgtcttgttgacatgtagattattctaactcactgaattttggtgaggttcc aagactgcattctctaacaggcttccagcctttatcaatgctatcaataaagaatctcat aggggctggtgagatggctcagtgggtaagagcacccgactgctcttccaaaggtccaga gttcaaatcccagcaaccacatggtggctcacaaccatctgcaacaagatctgactccct cttctggagtgtctgaagacagctacagtgtacttacatgtaataaataaataaataaat ctaaaaaaaaaaaagacagctacagtgtacttacatatagtaaataaataaatcttaaaa aaaaaaaaaaaaaaaaagaatctcatagttgggtccagccagtggaccaggatcgctatg agtacagcccaacacaaagtcacaaacttaaagcattaccagggactttgttgttgttgg tttttgttttgttttgttttgaaaaaacaatgttttaagctcctccattgggtggtcctt cagtgtgaacctgtgttgcagtatcacgaggctgcacatgcctggagcgcgcatcttttc tcgggctttgcaatgctccatttctcctcttacctctactttccttcttatccctccagt tctaagagagcactgcctactagaggcctgtgaggtgacagacgctcctctgaaaggcat tctaagaaaagctacccaagggccattgagatggcttagtggttaaaggtgcttgccacc aagccagatgacctaagttcaatccctgggctgcagatggtagaggacagaatggattcc cacaatctctgtctctccgtctttctctctttctctctttctctctttctctctttctct ctttctctctctctctctctctctctctctctctcacacacacacacacacacacaagag aattcaggtgccatatatctccagcacttcttaggaCCGAGTAGCACGTATGTCCCPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.