Mouse element [ mm2156 ]Position: chr9:63,698,557-63,703,285 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: Smad3 - Smad6 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence ACAGAGAGAGAGGTCGGACCctgagtaggacagcaacaaaggccattcaacggacgcccc acaatgacacgcctattccccttagggtgctgtcctgtatcagacatgaccattccacct ttctgtctttttggtgctggactgaccccaggatcttttttttttttttttttttttttt tggttttttgaaacagggtttctctgtatagtcctggctgtcctggaactcactttgtag accaggctggcctcaaacccagaaatccacctgcctctgcctcccaagtgctgggattaa aggcgtgtgccaccaccacccggctgaccccaggatcctgtgtgtgcctagcagggtccc caccactgccccatgccagctcagccagcaatgttgcagacagaggctcactagaaggta gctgggctcagtcaccatgctttggctgtggctgctgtcaccctgccacgagatgcaatc agacaagcaggctgggaagccaggtccctcatgaaagtgcctgcctgctctcacaagcac gagggccaatgttcaggtccatgtaagaggctgggcacagtggcacgtgcctgtggtccc agtgctgccatgagacaggaggcaaagataagcagagtccctggagactggctggcctgg tattggagcgataccaggtcagtgggagaccctgtctcaaacaaaagataaatggcacag gagaaaggacacctgaggtgtcctctgatctcctcatgtgtacacgctgacccacacatg ctcccatacacatatgcacacacatatgcatgcacacacacacatgcatgcacttgcgca cacacacaccaagcctgcagaattgtggcaagaccatatatcctttgaagccagctactt tttatctgaccctttagagatggaatttggctgatggcctttttagaagtggtgtctttc tgggagagaggaagggaatgctgcttattgtagggcactgggtgaatgaatgaatgatta attaattaattaattaattaatgaaatgaacaaacgcagctccaaaaaaaaaaaaaagag gctgttggctgccagtcttgggaggttgagtggccgacgccacgggcccgcgctctccct ccctgcacccagcctgcttcagatcttaattgagcaccaggggatgagcatgattgggaa tagcaggtgccaggacgctgtgaacattagggaatagtcacttggcaggctccagagccg ccaagcccgagagtgtgggcccggccagatgttcaatcattaccacccgctcttcctcag agacgttttaaggcgacatttgtttgttgaggaagcacagctgttcctggggaaatgggt ttccctccttggggcagaggagtggaggaggggcccagaaaagaagggaccctagggacc ttgaggtgggtggcaactaaagctgcccgttcaagcacaactctagcatcctgagcatcc aaggctgtgatgtgttcccagttcctgcagagcctgagagtgaggctcagaagggacaga gtgacacagccacgaggcttagcagtggcagggtccagttcctgacagccatactcagtg gctcagcctgaggtgccattctttgtcggtccgcctgagcacttctgtctcctagcctgt gcaggtttctgcctctgggtctcatttttagcaattcatatcactgtctcctgcccttac cttggactgtgaggactactgctgtgccatcgtggcacgactgtacctgcctctgtgggt gagcctttctctgagtcattccctgtgtctcctcaccctgaaccctttgtgcccaatgca catcagtgacactttagtgtctcaagctgggcctgggtgatgctgaagcaagctttgggg gcaatatgattcttctcttctaacatattctctctctctccctctctctctttctctctc tctctttctctctctcccttccttcccttctacctctcttaattgtgtgtgtttgtgcat gtataccacatacatgagtacccccacatgtaggccacatctcccatcattcctcaggca ccatcttccctggtttttgagatagggtctctcattatttttaaagtattttatgtgtat gggtggttttgcctgtatgcatgtctgtgcaccacattaacacctggtacctgtggaggc cagcaaagggtatcaggtccccagaactggaattacagatgtttgagaagcacctgtggg tgctcagaatcaagccagagtaatgtgaaagagcagccagcgctcctaaccactgagcga cctctctcctcccagggtctctcctttttacctagaattcaacaatgcatttaggttggc tggacagcaagtctcagattccacccatcccttcttaccaccacactgagttgtttacat ggctctcagagtcacactcaggtactgcaacaaaatgtcacaggctcgttgacctgtctt aggctctcaccatactggccctccaggttttcaactgagctgtgtgtgcaaaagtccttc ctgtcagatctgggcagtcatgggttcttggcgtagaccgatctcttggtgtttgtactg ggccatagaccctgggccccaggcaagtcacagcctttctcctggtaaccactgtgagac tccaacttctgagcctcccgaatagtcagtctctggaggagaagatgtggtttccagata tctttatcccttgagagaagcagattggctgttctcagttcttccctaggaaaacggagc cattttaaggaagggggttaaacaagaagggcctggtgagctggtatacacacacacaca cacacacacacacacacacacaccccacacatacgcacacacaccacatacaccacagag ggggggcagcgggaagggggagagagacagcctggaagtgacccaggatctctgaaggca tcaaaacttcataagaaacccatgcagagccaggcatggtagcgcacacctttaatccca gcactcgggaggcagaggcaggtggatttctgagttggaggccagcctggtctacaaagt gagttccaggacagccagggctatacagagaaaccctgtcttgaacaaccaaaaagaaaa aaggggaaaaaaaaaagaaaaagaaaaagaaacccatgcagctcacaagcacagaacaca gagaacaccctctactggttgaggtgtctcagcctgaggtgatcagagctgaggtaaaag ggtgtgtgaggaaatcagtcatgtgatcagagggtctgtgctcagatccaaccctgcagc ctccccgttagggacaggaagctagaggctgagttcagttgggtggcctacatgtcggct atgtccctgtgatccacacagtgaggactccacacagctcaggtgacctgcctggctggc cagagtctgactctgtcacacttcattgatgataaagtaatgtgtccccaggaaaaaggg ggtcacggtgtgcttagagccttccagacctggcctcatgcgttgctcctttcagcaggc tatgactgagaacttttgctacagtgaaattgtagcaatcaaaaagataaaacagaatga ttttgcttatataatgtccctgaaatccttaaagtcacagggacagaaggaaggacaggg gttgccagatggggaaagggcagatggaggtcacagacatggctttggaaactaaagaaa aacctgggaggttggtggcacaacaatgttaacctgacactctttacagacttcaaatgg ttacaatgtaaattccacaccatgtgaatttgactaaggcttcttagaaagttgttatca ttaggactgtgtttccttggggatgaagagatggctcaaatcaccattagctctccggct ccttcagaggaccccaggtcccctgctaggacccatatggagtgactcacaactggctgt agctgcagttccatggggatgcgatgccctcttctggcctccctagagcaccttcatgca catgcacgtgcaacacacacacacataaacacagaaattaagaataaaataaatctttaa ttaatattgtttcctgggatatgcagatctccctagcaaataaatacctagggctgaggt gcccttagtagcttgtaggcttgtggccagctaattggactgatagaaagttgctcccag atcctggggtgaggtcagtcctgcaaggacacacgtgagggtggctcagctccaggcaga tgggcaagagggacagaggtgagagagggtttggggactaggtggccttgggaatcctga cgccttgagtacctgggatttcccctcaaaagcccctagtaatgtatgtcagggtctgtt tctgagtacttggctccctcctcatggctgtcttgtccaagtatgtgtgagtatgtgtgt gagagcaatgatgagtaagcttgtgagtgcatgcatgggtggggaacacaagtgcatata actgtgtgaatgggttcagagaatatgagtgtgtgagctggtatgtgtgtgtgtgtgttg tatgtgagtgtgggatgcatgagtgtctgtgtgtgtgtgtgtgtgtatgtgtgtgtgttg tgtatgtgagtgtggggtgaatgaatgtcTCTCTCTCTCTGTGGGTGCAPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.