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Mouse element [ mm2155 ]


Position: chr9:63,680,582-63,685,226 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Smad3 - Smad6

Timepoints:
e11.5

Reproducible staining in the ectodermal lining (AER) and unidentified abdominal structure.

Expression Pattern
branchial arch (6 out of 7 embryos) 
genital tubercle (5 out of 7 embryos) 
limb (7 out of 7 embryos) 
nose (7 out of 7 embryos) 
other (6 out of 7 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Embryo 5

Embryo 6

Fasta sequence
GCATCAGGAAGGAAGACGGTtgtgaagtgtcaaagccagagagagttaagaagacaaagg
ctaaatggactcccagggcagagagatatcagagggaaaaactataaaaatcatgacctg
gtttctgttcacagtaatgcaagtttggctcccaaaacatatcacattaaggcaatatat
aattacagaggcaactgcagggtggggcacagggtctctgggaattcagttctaggttca
atttctctctgaatctgcaactgtcctaaaaaattccatcaattaaaaattttgagggga
aaaatgtgtgtggagacatggtagggggtagataaagaacgacaggtgtgggggtagctg
aggtctgtgggggtaccttttctctactctactttagtggatactagaaagtctactttt
taaaaaaagcactttttagggattctaagactcttccatgtcctcttcagggtaactaga
atgtcaccccagagccacccattgggaaacattaccctatcagcccttgggatgggagtc
agatatagactagctctgaaccctgcttctgtcagtctgggttatgggcatcgcccctgc
cctaagtctcagtgcaggcacccagtcctggaccataggaactgtgtcctccacttcctc
aggtcactggcttctgagtctttgctggggcaagcgcatgtgactggagcaacgctggtc
acgtcttgaggcatgcaacatgctaagtttgtggcccctccagcttctgtatcaggcgtg
ggctatgcctacagtgaaatcagctcccaggaagtcctgtactcggggggcaggtgctgt
ggggccaccgtgttgtccttcactacttcattacctgggtttatctgtctccaccagagg
gatgtagggcctgtgagacaatcgtacttcctcactctcacccttacaccctctgagcct
gccctgagcctggctgtgaggaagccaccaaagagaatggtgtacggatctggctatgga
tccttggccctcaagtgagaaactaagacatttttcctggaaggaagggctctggctgta
attgcatacaaccagccatgtttgaaggcaaggcctccctctctgcccatactaccttct
gtctacaatgagagaagtggacagcagtctttttactaggccttggcctcagtattgtca
ctgcccagtcagctgcaatgggtctctgtgcatggatcttggtgcagaactgtcactctg
ctgagaggagaggcagtaactgccacaggccacctaagttacctgtaagcacctgcccag
ctctgaagaccctttccagtcctcgtctccccagggtgcattcaatcaccagtcctgttg
ctctgtcctcatctccccagggtgcatccagtcaccagtcctgttgctctgtcctcgtct
ctgcctgttcttaccaagacacctgcgagggtctcagaacaaggccctggctcgagcatc
tttacagaagaagctgggaaagaagggccagatcccaggcacctcaggagccagagttgg
cctactatagccctcctgccctcctgtacagaattctggatctaaggagacacccgggaa
gccaggactggaagcttctatctctccagcgggttgggggtggggctggggctctgagag
tggagtacatccctgaacataaatcaaatgaggtgtaaaattgttccaagctacacttca
taaaactgctgcagcatgtcattatggtggccccagagctggtgacacacagatgggcac
ctggcaaggcgtgtggtggctggtgattagttgagggaggggtgatcttagacttacagc
tcttctgggagtgctgccagcccacgctggcccttgtcacctgatggggacttgaagatg
gccagacagagctaaggctccctactcctacctggcctctcttcctacagagctcagaag
atcacttaggcatctggatgacctgaggtaaaatccaaggctaaacccaaggctgccaac
aggccaaggcagtaggaagaggtccaagaaatggccgtgtctgtgtcaggtctcttaaca
ggaggcagtttgtccagctgctctagaactcggggtgcagggctggactgcaaagctggg
gaacagcttttgtttgtccttctactaaagggggtggaggggagaagggagagggggagg
ggagaagggagagaaggaagggagaagggagagagggaggggagaaggggggtaagaagg
gaaagagggggagggaggggggagggagggagggagaggagaaggaagagaggtaggagg
aagggagagagggagggagagagggagggaagagatgtaatctctcggcttcagagagtt
cctcaacagagaacatcccacttgccatcatctctgggtccctgctccatcccttctgct
aaagcttaatggctgccggcagtagtcagtggtttgaccaaggacaccaagtatcaagtc
atgtttgtgcacaaactcatcataagggcatctctagatatccccctaggaggagtgacc
tagggcctgtgcccctcctcctccccgctgtggctcccctcctccatggctgatttctct
tcccctttgacattcttcctcccctctccctctggctctccctcctccctcctcactgtg
gcttcctccctcctgtgcctttctcccctctgtggctcttcttgacctgcaactgcaaca
agaccctccctagagagccccccattaggctgcagcagccactggccaatggtgttccta
gattagtggaactgagctaagggaacacttctagggaggccctgaactgagccgagagct
aagggaacacttctagggaggccctgggtgtcctctgtgcgagcaaggttcactcttacc
attcagatcttcagacggtcctctcaaaacagacactaagacaaagtttggggtgtgtca
tgagaggtcacccacacttataagtggaagaaaaaggaagggggtaggcagagaccagtg
aagacccagcaaacagagaggaaatctcaacccaggatcatctgagcatcccagacggcc
aagcaatgggtgagcccaggctggcccctgcggctaatgtagacattaaggtactgccaa
ccaaagcaagtacctgccacccacgtgctaacagcaccctggagggcaatggtgggcagc
tccacgttctaagaatgtgattgagccctttcgtctcttgatttccacagccactgtggg
ggcagtttctagattcggttacctgaggtgggtagacacaccttgaaagcctttccatgg
gcttgatcccagactgagtcaaaaggccagaacgaactgagtaccagcgtgcatctctct
ctgtgccccgactatgcatgccacgtgaccctcctgtaaccacgcctaccccgccaggat
aggctgtctctttaaactgtgaggcaaaacaaacccgtcttaagttgcctttgccaagca
tctcatcacagcaaggagaaaaggcatctgattccctccctgtgctccagaggctgggct
ggacgtcaggatggcttctggacagagacaggttctgttctgtgcggtggtcctgtctcc
agccttctccatcccaactgttatctacaaagtgctgctggcccttaccctcctccaatg
atggtagcaggagaaactacaccttttacccttcctggggagtcctggggaatctcttca
gcctaggagcgttcaggaggatcctagctggatgggtaagagggggctgcaaagggaaac
aggacttgaaagagcagagagggcttcagtagctccaaggacctcagggaatgtcctcca
agaaatttcatgctccagcgagaacccataaaatcaaagatgtgtttccatgtatagtga
tttatgtagaacaagcagaaaaggctttccccattaatcacagggtgtgaggcagctgat
gtgcactgtacagagctctgagggttatggctggtttaaacgtagattcgacagcataca
cccttcagttcagtttttgagaccctccctgggcagggggccaaacatggctgtcaccat
ccaccttccagcgtggtatccctcattccttcctcacacatcaccaagacagcccagcct
caaacacagaattaatgcaagtcttgggaaaacagagctgtggtcaagaccatagcaaac
aggtctaggctgcttccagccagtctcagcaggctcaaatcacttctgaccaagtcaaac
cagttctagtgaattccaggattgaccagatcaggatgtaaccagctctaacgtgttctg
actgatcccagagatatatactgtttaaaggagattgtgaccagttccaactggtttggg
ctaaatctaactggaccagaccagttctgcccaaagcaaaacaaagctaatttaagtaac
tccaagctagttccaacctggccagctccttcctcctctgaaaatgttctcattaagaac
ctgctcaggaagtggggccccacctgcctcttttgaggggagacatcttatgtatgccga
gttctGAGGCTATGCAGAGCTGGAG
Primer
(+)GCATCAGGAAGGAAGACGGT
(+)CTCCAGCTCTGCATAGCCTC


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