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Human element [ hs2153 ]


Position: chr14:23,847,667-23,850,830 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: CMTM5 - MYH6

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCCAGTACTACCAGCGCTTCgaccgaattaactggccctgtctggtgaggaaccctgacc
cctagcccagtttggggcccttccctctcctctaaatgatgcattttcctttcctccccg
agcttctttccatttccacaccacagctgggctttgtcccatgctatgccctgcactcaa
aggtgtgctttgactcacactgatttcacagctgcagggccacgggcaatcaggaggacc
acatccgctagatctactctcccactcagcaaaggtccagccccagccctggcctggctt
gacccccccgggctggcatactccagccgctgtcccctgggttccagccccagcgcctgg
cttctggtcctggttgctctggttcatctgcttccactccctgggtagcagtgtgagcgc
tctgtctcttgaatgtgcttcatattgtgtgaggggtatcctatggaggggttcagaatc
cctcagggtcgggctgctggctagcctggaaaacttcagggtaacgccccctgccttctg
aggtcctgttaaccctgcacccctggcccccaggacttcctgcgctgtgtcagtgccatc
atcatcttcctggtggtctcctttgcagctgtgacctcccgggacggagctgccattgct
gcttttgtgagttcagccctgcaggactccttagcccctcaagagctcaggctggtgctt
gcacactttctgtatcagaagccacagccaggacttggggttctggcttgcacctcaccc
tataccttaacccaatggccctatagcctctgttttgccatccccactcccactcccaca
ggtttttggcatcatcctggtttccatctttgcctatgatgccttcaagatctaccggac
tgagatggcacccggggccagccagggtgagtgcctgtgctctgtggagaggagatgccc
tccccaccctagctacccatcctgatgtgggtccctacctggctctatcctcacagggga
ccagcagtgactctggggctacctggctcctaggcccagccagccagagaggacagtgga
gcccagacacgtctccttgggattcactagcccccagcccgccaaaccccaccccagccc
tacacagcagtctggcctgagacgtcactggggacttatctgtggagcctggtgctccag
gatgtggcttctcatgaagctctggccagaggaggggaacttattgggggagggggggtg
gaggggaggaatctggacctctaagtcattcccaaattaaaatattcaaattctactggt
gagtctctttcttccccagaaattaggcaggtcaggaatgtcaaggagtattcatgggaa
tgttgccagagcaggtcgtggtctgtctctgggactgggtctgagcagtgaggatgtggg
ggctagccagaagaagctgaagacatcctccaacacaaaacttctacgctacacctctgt
gtgcacggccactttgtggtgtgcctggtggctgggcatctggagttctgtgtctgagaa
ggcacagccttcctcatgggagcatgcatgcaccaccacacctgttcccgcaggttagtg
ggctggaggccaggcgctcgcctggggcgtgtgcagagctcccccttgtggtgtggggaa
gacttggcccacaggacgcagggagagggcagcctgaggtatcagaggagggagagattt
cccaaaatgcgaatgctgggagagccgttgattatcagctggtccaatgccctcatttca
cataagagaaaacaggcccagccaggggaggtgaactcatttgtgacagagctagggcca
gaacgcagctcttctgacacctaagcgagtgttctggatactgtactgagcctccttgta
gctcagaaaagaatggccaactcttccctccactgcgggtccaccctcccagcttgccag
ctcctcagcacacatttcctgagcatctcccatgcacactgtgctgggtgccagggcctc
agaggtgacggggggcctgccctttagcactcacaggctgggaaagagacaagctggtca
agagctccccacagtgaatgctatgggaaggctcaggggagtttggagcagacactgcca
cagcccgggagtcagccctgctgggccgagacagacagatgtgcagccagacgttcctgc
ccagcccgaggagcccagcatggcctggctcagcagctccatcccagctgacgtgctatc
tcctgtcgctgatgtgtgtgtgttcccgccctgagatacaatccttcttctggagcgctc
cttccagctgcaggccccagctcccaagtcctgcccgaaccctggatcttgaactctggt
cagagcgctctgcttccttggtggcagccactcctctctcttggtctttttcctgcctcc
tgcttcctgttctcctatccttgtgtcctggctcaccatcagaactggcagcctctcctg
ggctagaaccaacaggattttgtgtttctctggtcactgctcacatttctcagggcttta
tgcacagtccattctcatggtctcagaggagggatagaagaggctccacttggggagtca
gggagatggggtgccaggtgaacggttaaggaggcggtcagcagagcctggctgcaaagc
ccagtggggagtggggatttgctttgtgcagaacggggtcaggaccgggcctgtcccaca
agcagctgtgtgatccaggccagactgtccccagtaggagcttagagagagcagaaatgt
gaccacagtgtttccctgtacaggcacctgtgccatctgtgtctgtgtgagaaccaacat
gaaatgagcaatgcccaggcttggtcctcatggcatattggtttgggctcagtgttgatt
ggccccagagtctcaagatgccctcacggtgaggtgctgaatcataggaggcagggggag
acccctggggaagacagggagggggctccctgggagttacttcctaggggctgactagaa
tggaatctctcccatctcctttcccataccttaattctcagccagctctgagccttttct
ggcattggtggaaaattcatttCAGAAAGAATGGGTGTCCTAGG
Primer
(+)CCCAGTACTACCAGCGCTTC
(+)CCTAGGACACCCATTCTTTCTG


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