Mouse element [ mm2152 ]
Position: chr9:63,618,278-63,622,970 (UCSC browser)
Source: Lawrence Berkeley National Laboratory
Flanking genes:
Smad3
-
Smad6
Timepoints:
e11.5
Expression Pattern
| hindbrain (rhombencephalon) (9 out of 9 embryos) | | midbrain (mesencephalon) (7 out of 9 embryos) |
Embryo 1
| Embryo 2
| Embryo 3
| Embryo 4
| Embryo 5
| Embryo 7
|
Fasta sequence
ATGCCCATCACAGAAAGCCAcaactggacacacgcagagatcaatggatcatggggagcc
cagccccaatggtgacatctgcatcacagctcctcgtctgtgtgtggttcagggaacatc
gccgccgaagaggtggtgaaagactgtaaaggcagggtaccaggacatctcccctagaaa
cagctgtgtaaataagacctgaggggggtctcaggggtcctatccctacacaaagaccta
aaaggaactaatgactgctgagaggagaacgagtctctctgaggagcccctagttggtta
tctaatacaaagtggttggctcaaaacaacaaaaaaggactcagtagcatgtgtgtgtgt
gtgtgtgtgtgtgtgtgtatgtgtaacaataacaatcaaagaaaaagaagctgtcaagct
gaatgtggtggcacatgcctctaatcccagcactcagaagggagatacagggtctctgtg
agttcgaggtcagcctggcctaccaagtgagtaccaggacagccagggctacccagaaaa
ccttgtctcaaaaacaaaatgaaacaaaacaaacaaacaaaacaagacccccagaggttg
tcaattgaaaatgagaagtagaggccggagttggaggaagggcacttgggaggggcgggt
ggggaggaaaagtaacacaattatattttaattaaagtgtatttttaaatagaaataata
aagttcagagtgtgactggattagcaatcaggaatccaaggtctcgcagctacagcatag
catactgacttctgcagcaggccttcctcagcctggacacctgcagtgtctgggttgggt
actgtcaagatccgggcagtctggatcccaatcctcctgtttctggtctggattcagctt
taatgcactgtatgttacagccctcagatcactcctaggaaatgacaaggacctgcacac
tgctgggtgatccaccgctctctgccactcacaggtccagaggatgtggctgaggctcca
tggaagaaatccctcaaccagcaaaaaagttgaagtttagggccttcccagaagtgacag
aggaatagacatcaggttctttcaatggagccattctcaatttggatctgcactcctacc
atcagtgtccctatccgtaagaccacacaactgcacccatcttgggccaagtaaacttgg
gactccatttcattagccacagcagacattgctaatcaattacccagttcttcccttcct
tggaatccctcttaaaccctgccagcttccatgctgctggctaaaacccgtttgtctttg
agactcaggctctggcctcattccaccaatggagacacattcctcaggcctttgggaatc
ccctctctagacccaaacgactgtgggagagaaacacctcaagttcctgtcagctttaat
caacagctgaactctcctggctgatcctgccaagaccacccaggaggccctggagataag
agcgagaggggagctgacagaagaaagtctggaaccacgagggcatccggatccacattg
ggcctgagcatccatcttgggagagcacacccaaggtattttatggaggaaatgctggac
aacaatggcatggccttctgcccttgagtggtggcacacagcttcatgccacagccagaa
catgagggccgtgtttccatccactccagcagacaaggcaggaacgcatctgggcaatga
ctgtgtggccgtgggtagtacctgggacaaagctgcctctccctaaggtctgaatgagct
caggcacggactctctgaggaacccaacctccatccttcaagtctgcataagcctcagct
gccagctaaccaacagcccatgtgttttcacaggggctcccttcccctctcacattttct
aagcaaagcctgttaccctaacaatgtccagaacacacacaattctcgactccccctcaa
actcagatcccactcacggcctgcagcttttgtgctgtgtgacacatccattaagtgtgc
cttggaagcagatttaagccaggttgaggcaggaatgcatttatcttcttggggctgcag
cagggaatctaaaaatctcctcttgggctcaagtcctctgggaaggctggagttacatgc
ccagcacctcggcagtccagctatgcgtttcaggattggtcaattctaacaggggaacgc
tgttaataaacggttactcaggagcagcgaggggacagaccacgtgtggagactctaagt
ggatacattaattatgagaaggaacggcatgtttttatttcaaaataagactaaggaagc
ttgctgctcccacatacgtgtgccccccaccgtctgtctgtctgtctgtctgtgtctgtg
agctgacagattttctgaccatactccagcatagttctgcttggattaagtagacacacc
ttctgggagtggatacatttcattcaatttagaagacagggtctaccctgggcatacact
ctgagaaagccctccttggaaggaccagtagataaagcaagcaggtacctaggccagggg
ggcaaaagtcctctccctagtccaaggaaaaaggttgaactcaattgcataaattctgga
ttttgcaatccgaatctctagaaggaagccattccaaggtcagcaggcagtggggcaggt
ggcatttttttcaggccagagtcggtttgatttaaacctcatcaagggaggccttatctt
ctaaggtgactccttcacctggcccatcctctgggcagttcctgcaggcacacagagatg
aatcagacaaggacttgaccacagacgcccaaactcagctgctccaggctccaacattca
gcctagcagtgatgaagaggaaaagcagcctttgtttctgcacagcttggctgtcacctt
ccagagtcctggaatagaggttatgagtcaagctctgttctggggaccacactcacatca
gggtagctgggcaacagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
atgctcctgtgtgtgctcctgtgtgtgcacctctatgtgcatagtgtccctatatgtatg
cacctgtgtgtgtgtgcacctatgtgtgtgcacctgtgtgtgtgtgcacctgtgtgtgtg
cacctgtgtgtgtgtgcacctgtatgtgcgtgcacctgtgtgtgtgcacctgtgtgtgtg
cacctgtgtgtgtgcacctgtgtgtgtgtgcacctgtgtgtacagatgcatacggaggcc
aacagtcaatagcaagcatctccttcaatcacttcccacctagcttgctaatcttgttcc
tgccttcccagcactgggatcacaagcctgtgctgcttcatctggacttgtagacaggtg
ctgggaatccgaactcgggtcctcatgcttgtgtggtgagtactttgccactgagccatc
tccccagccccctctggggagatttgattggatcttgactctactgatgtgagtgttagg
ggacaatgcttgctttgctgcttctgcaaggtcctaggatgtccctgagcacatcacaga
agtcttcagagttggttcctcaccttccaccatgaggtaatgaagggaaggcacccatga
ggctgacagacgctgccttttctccccctaaggtttatttttatttatgtgtttgtgtgt
gggcttgctcatatgagggcaatgcctatggaatccataagagaacacagaagagggcat
tggatcctctggagatggacttataggaggttgtgagccacctcatctggtgccaagaac
caaattcagggcccctgaaagagcagtaggtactcttaaccactgagccatctctccaac
cctgacaccctccttcacagcacccatctttcccatccatctcccacacacccagtcacc
tccaggagtgtaacaatatctgtccatatccttatttacacagtggctctgcaatgccct
cccctggtccacaaacctccctgtgcaagatcaggcttcgaagttgaaggcacttagttc
aagccagaagaaccatgtgtgctagaagaacccatctacctcatgggtgtgtctttgtct
ctccagaagaggatcatgggaagaaggtctttttctttctagccctcagccttccctagg
ctcagggcaaggggcttctgccttttcaccagagggctccataactaggtgcaaaggaaa
agaggctttgagttttgctgctcagggtctaaaactccatttctctgtgctagcatgtag
catatatgaggccctgggtttcatcccaatactacaaaataaatagagaataaataagac
tcggtggcttgctggtcttgcccaggttaggccagggttacagtatgagcaggtttcccc
gtccctgggtaatgcccttgcacataactcacacatgaggaacgaatgcggccatgtttg
tgcagagtttatttagataagaaagcagcctcagcctcctgggaggggccaccgcagagg
gcaaggcacaagttagttattaatcaccatctgcaggaaggcagagttcttaaggcacag
agcagcagagcaggcacagtgctagagtcaaaggcctgtgtccaagtccccatAAATGCC
AGGTAGGGTGGTG
Primer
(+)atgcccatcacagaaagcca |
(+)caccaccctacctggcattt |
|
