Human element [ hs2152 ]Position: chr12:98,883,495-98,887,039 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: LOC643770(intragenic) Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence CACAGCACCAGGTCAGATTGtaaaacttttaatttttatttattttttttattttatttt attttattttattttttgagacgaagtttcgctcttgttgcccaggctggagtgcaatgg tgtgatctcggctcactgcaacctccacctcccaggttcaagtaattctcctgcctcagc ctcccaagtagctaggattacaggcgcccacacccccaccccatgcctggctaatttttg tattagccagagatggggtttcaccatgttggcctggctggtctcgaactcctgaccttc aggtgattcacctgccttggcctcccaaagtgctgggattataggcgtgagtcaccatgc ccagccaaaaattttattttttacctttttaaggtgcaagactctcagtaaattctctcc tggttaaggaaaaatatctggaaagggaaggggattctctactgaaagtagattttcccc acaagagacacctttgcagggccatttcaaaatgtgtcaaaaatatatatatattttttg gggtaaactacttcaatttacttcagggcctgctgtctgtcatgttggtatcttactgct acaaaaagccttctttgtcagacttatgttaatgctggtcagatgtgcctgaatcccaaa gggactctgtcccaaagggaggagagtataatgaggcttgtctgaccacctgttcccatc atgacatgaactagcgtttcaggtaactttggaatgcccctggacaaggaggcatccatt caactgattggggagcttagaattttatttttggtctacatggtaaagcttaaagttgcg gaaatcattatcctcagtcaagctaaagcctaggtatccagacctctctttcacctaatt tatttgcaattaatccaaagttctaggccaggcacagtgactcacacctgtaaacccagt cctttgggaggcggaagcatggaggatcacccgaggccaggaattcaaggctgcagtgag ctaagattgcaccactgctctcccgcctgggtgacagagcaagaccctgtctctaaaaga aatttttaaaacaaataacaaagtactggtttatgctgtatttataaaacaacatatgta gtaagattttcttagttttagaacccagaaagctgtgccaaatgctttgagagttgactt atttcctattaggttttttaaatacttgcagtccagatactgcttttaattttttaaaaa acagtatccatacttacaggctctgattaagtttcaaagactaagcctgccatgcttgtc ggtgtgtgattccttcctctaagattccagacattcccgtctccaggcatcactgtgtcg ggggagcgctgtgtgaaaatggctgtgatctttgtgcggtttgtccggttatacctcact gggacaccagagggcgcaaggagggccagcacttgtttttctttaaatctcgaatcaaag tccatgcagagaacaacaaaagacccggaacacaggggccttgagacaaagggactcagg ggaaaaggctgcacgccctgttttactgaagtggaatttgcttcttcaccctcctcacct cctcacctcctccccaccttaaggaactagaaataaacaacttaagctgcaaaataatga aatctggctaacaaggaaaaccaaactagaatacattactcaacatgtcataggctaaga ggactatcacaaatgtacatttgagctatttgctttgcctaatattaataactttaaaga aaattttattgtttgcttttctgagttcaatatatgcacatagtagaaaatttagaaaag gtggaatagcaaaaagaacagcgatcatcaacacactcttaacccagatataactacttt taatatcttcagctacttctttccagatgttttcttctttctttcttccttttttttttt tttttttttgagacggagtctcactctgtccccatgctggagtataatggcgcgatctag gctcactgcaacctccgcctcccagattcaagtgattctcctgcctcagcctcccgagta gctaggattataggcacccaccaccacgcccagctaatttttgtatttttagtagagacg gggtttcactctgttggccagcctggtctcgaactcctgacctcaagtggtcctcccgcc tcagcctcccaaagtgctgggattacaggcatgagccaccgcacccagccaccagacgtt tccagtacttacaaatgcatagaaaaaaaatgggattctgcgtgctattttgtgctggtt ctcttcttattttctagatcactaacttcattttattgataaattctgataataaaactt tgctaatcatatgagttaatcacaggtaggagaataagaaatttcaaaagctacaggcag cttttttcccaaaatagcagcaacttgaatgccagacctgagtcatgcatttgaagcaga agtttttctgttgctttgtgtttagaaaacacggaaagactaaagaaaaggcctgtcgca gtggctcacacctgtaatcccagcactttggaagtccaaggcggatcacaaggtcaggaa tttgagaccagcctggtcaacatggtgaaaccctatccctattaaaaatacaaaaattag ccaggcatggtggcccgcacctgtagtcccagctaatcgggcagctgaggcatgaaaatt gcttgaacttgggaggcgcaggttgcagtgagccaaggtcacaccactgcactccagcct gggtgacagagtgagacgggtctcaaaaaaaaaaaaaaaatccaaagaaaagaagtagaa actgttccatcccaccccaaacaggctgaataatttgtccttctgggtagcctgaggact gaatgccaaagggccagggggtgtgggtcaccaggaccctttgttcctcacactggggct agtgtttgcctcaaagctagacagatcagtaaagctattaaccgggataggtcagcaggt ggtcagtagggcaggaaaaaagtcaggaaaacggaggtcactgatctcctgttgggttgg ggccaatgttggcaggcaggttccttaaaggacaggaagcttaggccagcccaggaacag ataactctaaggaaagtgatggcaagatctgaggccctgaaaacctctgagggacaccta atcactaagcccacagattccttaatttacagcaacagataaaggtgatgttctcggcca caggaatttagttaaatcactggagctgtctggcctcagtttccttatctgtataacgaa aggatcaagaagataggtaaggttcctgtcagttcctcaaagattgtgatgtttaattct ccccagtcatgcattataatgaaaggtgaagacatttcctgccccctgccactccagtcc cctaagcagcagcccctccaccatatactctttcccgcattgccaCTTTTCCCAAATTGC CACATPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.