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Mouse element [ mm2149 ]


Position: chr9:63,519,651-63,524,393 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Smad3(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ATCACCATCATGCCCAGCAAactgtggtagaaatacaaattaatccactctgggagaaca
gcttagcagccgcctgggaaggtgaagcatgcatgcagggatgggagggacggattcacc
aagggaagggagatatcagcaggatgccggctctatttgtcatctgattgtgatggtttt
atggacagatacaagttgaaatttaccagacggtacactttaggtgtgggtagtttattt
gtaatttataccaggcgagagaggtgaagactctggacttgtctaagcctggatttactg
ttcccatgtttagcaactctatgaatttgagcaaaccacttataacttcaggctttacat
ctttatctgaaatagaagtcccatcaccagactcgtatgagacctaagacactttgtgta
gctctgggaagagtgcaaacacatcaggcaacagtaacccactgcacagtaacctcctgt
gcctcttccctgcctcactcccatgcccgatgcctggctaaggaaggagaccaacattcc
tggcttgggtgatatggaaacacagcaggagcagccaccatgggacttcctgtcttcctg
gtgcctattaccttcataggactccaggctcacagcaagtcatctccgccagcaccatgc
tggatggctcataaggtaagtctctggtgttcctggctcactgcatccaaccccttatgc
cagtctgaagcaaaggtcaaacaagccttagagccacacacaggagtctgtaccagggct
gcagcaagaggccagctctcctggctggaagacagtcactctcgacaggtcttgagcaca
tgactgccagtcatctgataagattttcaagaagtcatctggtccatgtctctgcttcta
aaatctacactcgcactgcaaaatggcaaaagtgtctcattcacttcttcagagacaacc
atggcaactcctcctcaaagcctgggctgatcttccttcctccctctgtcccactcaaaa
tgcacaccaacacttaccaaacagtatgagtgaactgggcgttccagctgctggatttaa
cacagctgatgtgtccagaacacaccctcccaagcctcgcatggctgggagcccattgag
taaatctagtaattaagtcttcattctgagctcatgttgccatgagcttgcttagttaca
gagaaggctgtgttcatgacgagcttctctctctaaaccaggcctgcctctctcccagtg
gccaaacgacttgtgaaaggcagtcccaggaagccacctcaagacccacttcccaactgt
gactgagttctcttcccacacccagtgtcttcctcgtggttgacccccctaaacatcttt
ctttaaaatctccctccagctccctggacagaaggttttaatctttaaacatattcttcc
ccagccaaacaatttcctgtggcaggaaatgaagcttcctcccattggctccaaatgaga
cctgtaaagtgtcccaaaatggtggtgggagccatagccaaggatgcggacctgccagag
gctggagctgatggtgaggatgaagtcagccagagtgccgcctgggtgaaagggctgggc
tggagccacctcacgccaatactactccttatcaatggtccagcaaccatgtgggggaca
gcaaggggtcacaggtcaggaacagaacatagaaactccagaaatacctcaggacctagt
cagcgtgaacatgtaccaggtccactgccatgtgagaaagcaacatagccttgacccact
gctaactgcctagctcagaccttcagaggctccccaaaggccacagagcttctgaaaagc
agaggcagactcccaagcccagaccagcactgaaaacgggtggaggtaggacatcagggc
tgaagggagccttttgtttccacgtgctccatcagcacctcttctgaaccccggccacat
ctctgaaacccgggccatgaagtgaggaaatctgaaggacgagcttgctctccttcccct
cgctccccacccctcactactggcctctggcctctccctgagacgagctctcttttcagt
tatcctgtggagtactaacagcaacagtgaaggagactgaggctcaagtcttctaaagac
cttaccccaccagatgctcgcagccaaccattggactaaacacaggggtccccaatggag
gagttggagaagggactgaaggagcttagagggtttgcagccctatggagggggcaacag
tgccaacaggccagaggcccgagagctcacagggactggaccaccaaccaaagaatacat
ggggagggacccatggctccagccacatatgtagcacaggatggccttgttggacatcag
tgggaggagaggcccttgggcctgagggtctttgatgccccattgtaggggaataccagg
gcaggaagacaggagtgggtgggtgggtgggtgagcactctcatagaggcaggaggagga
ggagggatgggtttccacaggggagacctggaaagggggaaacatttgaaatgtaaataa
agaaaatatcaaaaaaaaaaaaaaaaaaagaccctaccccacctgtgagcatcactcaca
tccactcatggcaagaggcaaggctgagatgcagccactagacagcaccggccgcaagga
ctgtcttgtcccttgactgctcctagacaatgggacatcagcagaatcgctgtgttcttc
ctccttttcccctgcacctcagcgagcaccaggaagtaccaggcagctgctgccccatgg
cccattggggggtgggcacggcttgttactcagcactagccgactaatacactgactccg
tcattagtcttcttagtcgacttgcaagcgcccattccatcttcttgtgagaggctgaca
aacttccctccggctgcctgagttcacagaaagcctgtgtgactcactcctacaccctgc
cctgatctcagctgcatgacccgagcaggctgtagtcatttcacaaggccttatctttag
tgtgtggagaatgtctttcctctgggccttcgggattcatctacaagcagcatgaactta
cccccaaacgctcctgtttagtttttcaagttgtcagagtaggatactcatcccacagcc
aaatctctgctcctacataaccgtggctttctcgccacagtttctcccaacacctgggag
cctctggtgtaaaacagagaggttcttgcctaacttgggtttgtcgatgaaaaccacgcc
cagccacacactttcctaagtcacacctgtatcagcagaagcacacattcatctgaacaa
tgtaatcccccatcacacctctggccttcactgctctgcagaaatcattacattttcctt
tttttcttttttctttcttttttttttttttaatttggattatatgtgggttttattttt
gtcctttttttttttcctggtccaaagggcaaagctaacccagaaaaacagggagaaaac
aaaacaacaacaacaacaaacatcgtggtggctttaacggtcccttgcattagtcttgag
tggctttggagccataggcaattgatgtaggacctctccttctatggctcttgaagtact
catatcaaaaattttccttctgtgcaaaggactgcccaaaaaaatcctagaacccagcct
tgcccccttatggagagatatggagagatggaccacacagtgtggccgtcagggtgtcct
gagggcagactctgagtatggcctctctggatcaggaagagacagggggacagtgtggtg
agagatctgggtgtcgttactttctgtgccttgtaagtaagacattaagcagcccccagg
ccttccctcttagatatcagaggcaccttcttcactggaaaatctagacatgaggagcac
cagaggggtctgcttctccactccccagggagccctgggctaagggcacgcctatggtta
ggcacaggtgggaggggacacaaactccagagcagacactgtcccagaatacaaggaccc
tgggtatgctgagtgggggcactattcttgttttcaagtgaaaactcgatatggtgttag
gtcacatccgatgtgatcaacaacacagagaagcagggcttgctgtccagcctgggtgct
acacaacaaactctattttctataactgccaaataggctgtttgaatccacagatgacct
cctttggctcagatataagtgtctttgtcccctctctcttccctgtaagaaggagcagga
tgaattttggacaggacgtagggaagggatgagggaagggcaggaggagcagaagaggaa
gaggaagaggaagaggaagaggaagaggaagaggaagaggaagaggaagaggaagaagaa
gaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaa
gaagaagaagaagaagaagaagaagaaaaaaaggaggctggtgattcatcagagctctgc
ttcatagttgtgctttttacacgctggctttccctccacacactatgtccacaagtgctc
aactcttcagtaccaccaggactgcaggactttcgagctatggataacgctgctaaaatc
caaactgattctgccactgcaagccaagggaaggcagccaggtTAGCAAAGCCATCCAGG
TGG
Primer
(+)atcaccatcatgcccagcAA
(+)CCACCTGGATGGCTTTGCTA


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