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Mouse element [ mm2148 ]


Position: chr9:63,943,091-63,947,710 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 2600006L11Rik - Lctl

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AAAGAAACCAAGACCGGGGCagggtgctcacacgttttcccgtagcttaccacctacaga
gccaagtcttgaaccgatgcctgttcagggctgggtctcatcttgtctgcttcctcagca
tggccacaagatcaagcacaaatgcccaggaaaacctatgtcagacacacccatttcaat
gggtgtcttgtggggacaaagccttttcctggaatgtaggctggatcctcagacccacat
taggactagatgagggggctctgtcccctgtgtgcctcagctttcccacacataaacagg
ggatgatacagccgtgtgggctgacatgacagttttccacggacatacagatctccatct
gttggttcaggtgtcaaagccctgccgggctctggagtggagagcaggttctggcccaaa
gccactaagacaggcgggggccacctccgggactctctttacctgagagcgactgacttt
gcccacaacccacatctaaagtgacagccaagaaaaggctgggcctgggatgtttgcttt
ccagtttgtagtgattatggggtgataaccacagtggccagcaaagtcaaagggaactct
gttcccccagaccaggggtctctgaggactacaggctacccacagtatgaactcggtggg
catagcctgcggctctgagcctctctctgaaccttgaggcattcttatgacaatctgcca
aggtggctcagctgtcaaacagaaccaacaagcaaggagaggtacaggagatgaagtgag
tccccaaagctccctcagccagctaagtggcagagtcccacaagagaccttagccccaga
tctggcctcagtctttttctccctgactccctggagtgcctgggccaggatagagcatcg
acttgatgatacctgattgtaaatggaacaaccaaagaaagaggcatcctcgacaccagg
gcctcgccactgctgggaaatcaaaagtggtgaggtttcaagtgttctgatgccagggac
ggttgggatgctcggatgtgatgtcagatgatcttggtgtaggtcaagacttcaccctac
tccacttcctcctcctacagcaggagcaagccttggcatggtgacagagtgtctacggtt
aaattgggtacgagtagacttgaccttggagtttatccattagcttccacagctttgcat
atgtggtttttgttttagttttgagacagggttttactacatagccttggctgtcctgga
actcaatgtgtagaccaggctggccttgaactcacagagatctgcctgcctctgcctcct
gggtgctgggattgaaggtgtgtgtgtgtgtgtgtgcctctgtgcctgctctttgtgcac
gttgagaaatggggaggtcagggtagctgctggcagaaacaaggggtgggttatcaccac
tgcctacatctggtctccctccaaggctcagactctagagcagtggttcccaatcttcct
aatgctgcagccctttcatacagttcctcctgctgtgctgacccccaaccatagaattat
ttttgctgctacttcttttttttttaaagatttatttattgttatatataagtacactgt
agctgtcttcagacactccagaagagggcatcagatttcgtcacggatggttgtgaacta
ccatgtggttgctgggattttaactcaggacctttggaagagcagtcggtgctcttaacc
actgagccatctcaccagccctcgctgctagttcttaagtgtaactttgctcctgttatg
aatcataatgtaaagatatgtgttttcctatggcctcaggtgactcctctaaaaggactg
ttgggttcccaaaggggtctcgacccactgctctagacacactaaaaaatcaggtcctca
gtgaatacataaatgtattaaatttgagtttgtcatctagaagatgcctaagaacatttt
aaatatgagcattatgttttgtttatttttattgctggaaacagggtctcttgtagccta
ggatggccccaaactcaatatgtagctgaggatggccttgagctcctacagtagccccta
cgtcccaagtactggaattatgcccagctaaacatgtatggtttttgacatgttaattac
acttttagaaagctgccttgcaaataaatgcatgcttgtatccaaaaatcaagagaaacc
tgtcatgtagataccatttgcagtaagaaaaaaactgaaccagccaggcatggtggcaca
cacctttaatcccagcacttgggaggcagaggcaggtggatttctgagttcgaggccagc
ctggtctactgagtgagttccaggacagccagggctacacagacaaaccttgtctcgaaa
aaaaaaaaaacaaaaacaaaaacaaaaaaacacaaaaacaaaacaataaaccttcataca
atgctgtaatgttcacaaaagcacggtttttgttttaaatatttttaaattatttatttg
tgtaagtgcatacacacacacacacacacacacacacatgcatgtctatgtccatggagt
caagaaagggcattcaattcctggagctcttggggtgctaagtatgtaacgccagttctc
tgaaggagcaacaagtactcttaaatgttgagccatgtccccagcccctcgttgtaagta
ttcttagatccaagggggtggttagtgcttctttcatgattgatacagacagtactgagt
ctaggatggggaacaaagctggaactttttcagagaattctccttttaaacagtacagca
aacacactgttacagtgcccaggaacttcatggctgtaagatcaggcttcttacatatgt
agctctatcagactaagggtgagaagatctgtcaactgactcaagaacggtgcaggggag
aagacagaggcacaaagtgctaatacattgatttcatggcttacaaaatcacagagccat
gtaaaatcccagcatgtcgccctcctgtctccctcaggccccagggcttccctgacgctt
tgaatccaggccttacgtgtggcctggaccttccacaagagcttggggacctctgtcccc
aagctttaggctgatgttctgctgggcctggccttgatggcccttgcagggtttgtatac
tgagaggagtgtatgcctgcagctccgtctgctgaccagaccacagctctgcagtccagg
gttcctacctaagatgggagttgtccaagttgggtttttgttgctatgattaaacactga
ccaaaaccaatttaagggaggaaagaatttatttggcttataggatactatcaaggtagg
aacctggaagcaggaactgaaaaacagaccagggagaaatgctgcttcctggctggtccc
ccatggcttgctcagtctgcttccttatacgacccagggccacctgaatactagtggctc
agcccatgtgagctgggccctcccacatcaatcactgatcaagaatacccccagaagctt
gacagcaaccaatctgatagaagtattttcttttcttcccttcccacccctcaccaaaca
gtgtctcactatgtagccctggctgtcctggaacttatgatattgaccaagctggcctgg
aactcagagatccacctgcttctccctcccaggtattgggattaaaggtgtgccccacta
cgcccagcttagaaacatattcttgattgaggttctctcttcccaggtgactctagttgg
tgtctagttgacaaaaaaacaacccagcactacctgtgcagatggcacactaggcaaagt
cacctgcagccaagctggatgacctgggttcaattcttgacacttgtgtaactaaaaggt
gaaaactgagtcctacaagttgccctctgacctctacgtgcgttctgtggcatgtgtgca
cgcacccctacacgttcatacacaagaacaacaaataacacagaagatcacagttctgag
tggtccaacacctttttctgacttctttgggcaccaggcacacactgtggtgcacagacg
tacaggtaggtaaagcacacatacactgaaaagaaatagataaaaacccacagaaataaa
taaaggaaaatgacaaaattacctccctgggggggggatattttaaagagaaagacgtgt
ccctagaggtagcaggaggatattgctgcagccccggttcctgtagagtcatagccacct
gtgacactcgaattcccttctggaacacctaaacttggaacccatccctcctcccatccc
agatccttccctcaagacaggtgagcctgctttccaagatgagcaagaatcaggcctggt
gcctgcagagctcaggccttcaagttagctctgaaaacaagcgcagggagcagaaagaac
ttagcccaggtcatctagaaggttgatagcagaatcaacacgagactctggagggaaatg
gtgtcagaggcctccctgcctgtttctcgggtttttccagattcatctgctgccccagcc
ctactgtcagctacaaatatttattaagtgcctaccacatATAGTGCTCTGGTCTGGGCT
Primer
(+)AAAGAAACCAAGACCGGGGC
(+)agcccagaccagagcactat


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