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Mouse element [ mm2144 ]


Position: chr9:63,894,153-63,898,753 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: 1700055C04Rik - 2600006L11Rik

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCAGTTCCGAGACCTGGGATtcaaagtggagcatagccgtctttctatgctgggcactac
ctgccccacagcaagcagtgaagggccaagtacatctctaagtcaagtcctggatcttct
ctggagtctcaaggtagattattactcagggagtgacactggggagacagctccgtgggt
aaagtgcttgctctaaaggcatgagtttgatccccaggagccacagaaaggccagacgtg
atggcaagtgcctgtagtccaagcactgggaaggcagagacaggaggaaccctggaactg
gctggatgatcagcgtagcccaaacagcaagttccaggttcagtgagtgatcagaagcta
atgtggaaggagagatggctcagctgctcagagcgcttggctgacttcacttctcaggac
ccatgtgaaaccactcatagcctcctggaactccagctccaagggagcgagagccttctt
ttggcctccacaggcacctgcgcacatgtataaacacacagatggagacacataagtaaa
aataaaaattcttttaaaaataaaatgaagtgaaggaagaggatatctaatgttggcctg
tggcatcaatatgcacagtacacacacacatatacacagagagaccaacagacatccata
catacacaagagagaaagagagggagaggaagagggagggagggaggatcgatcctgggg
attagctgatgggacatatccatgagtgaaatcctggattgacccagctgctctgagttc
cagccccagcctgctctcagattggtggcgtaggatggatccacccctctctgtgtttag
tcacaatatcatcatttcctttgctggacagtaagtcgctttctctacctacgacgtctt
cagagctctcaggtgaatgaaattgaaggatgcgtgttaagatgcagcttctgcatctag
accctctttacgatcagcttccaaaccccaacctccccttcccagaagcttctcgggcct
tcagctaggcacaaccacagcctggagagttggcacccctctccaggggcaccttttcct
tgtctgagatcataattcaggactgatttccaagatgttcccagagccctgagtagtctc
aggcactggaccagtgagagagggacccaaacaaccaaagtgaaccaaagtctctgtcct
atgtctgcagaaaaggcttaggacacctgctcctcctgccttctgagtagttggcgtagt
gatgacccctgagacactccacaagacagagagagctcacttggagtgggtgttttgaaa
cctcaaagcaagtccatagcgacatgcctcctccaataaggccacgttttctaatccttc
ccaaatgtttccagcaactggggccaaatattcaaatagattctacgggggccattcata
ttcacagcaccacagtaaccaaggacgatcttatcttggcatttccgatgctttttgcct
actcctcctcagtgctctgattagagctaagggcatcaggcacgacgtgatgctggggat
tgaacccagtgagggctttacatatgctgggtaagcattgcaccagccaagctgtaccct
ctgcccacacatatacattttaaaaataagttgtggggttgtgggccagagatacagctc
tgtggtaagagcgcttgctactcttccagagtaaccaggttcagttcctagcacctgtgg
tgggtatctcacaattatctgtaactccagctctaggggatccaatgccttcatccaacc
tccatgggcacactcacaaacatgcagacacacagagagacacagataaatatacaggaa
ataagtaaataacggatcagatgcaaacagagcacacagttgaggatgtgaagagcaagc
atctttctaagccctgggaccctactggcacttcacctaactagaggctgaatcccctca
aagatcctcccttagggcaagatgaggggcctgggccccacaggaagcacatgctctttg
caccttgaaacaaagctgcctggggtcacttagtctctacttggctacccccaaatagcc
aaggttactacatgtctcccatgtctccatgtatcaaagtccccggcaaggtcttctgcc
acatcatctgaacactcctgatctaatccgatcccagaagctaagtagagccgggcctgg
ctagcttggatgggccacgaagtccctgggaagagccgctcttcctggggagctcagtaa
gagatgtgacccggggagaaaagaggcagagtagacgcagtgtgaacaggaacctgggca
gccaaggaagtaatgcttcacagagtttctctgcagaaaggccccattggttgcctccat
agccttcctcggagccttcacagcttacatactgagtgtttaagtgcttacacacacaca
cacacacacacacacacacacacactcacattgaaatcccagtgggacactacagtcttg
atggtatctctcttaaagtgaggaagaaaaaaaaaaacaaaacaacaacaaaaagaaaaa
tggagcttagaggatcccaagcagagagactgacatatataaagagcatggaatggttaa
gaaattccaggggacaccttagtcttggtggcagacactaaacaggaagcggcagtgtag
gtcgggcgtaaaagtcctgagcatgaaagcatgcatctggattttatgagagagaaggag
tttttgaagccgtttactgcaggagccagcttgtgttctgcctgatctctcacttcctgt
gagtgcttaggtaggagatgatacgggtaggaggcagaaatcctggcctagaaagccagg
acgcaaggtttgagggcctggttgaagctaagcagacactgtatactgtatttctcttaa
attggattatagtctctctctttttattctgaattaagctgtaatggaatttttttgttt
gttttatgtctttccaaggctgagtctttttttgtttgtttgttgttttgttttgttttt
tctctgtgtagccctggctgtcctggaactcactctgtagaccatgttggcctcaaactc
tgcctcccaagtgctgggattaaaggcgtgcgccaccagtgctccgcccccaaagctgag
tcttaagggagtgcagtctggcttcaaactacacagccaacgctggccttgaactcacag
ttctccaccatacccagtgtgggtaaaaatcaataaagcgtgtgaggccggtgactaagc
cactacaaaagagcaaaggtaaaaataatgagagctgttaatgcagcttcacgtgcccgt
tgtactgttttgtagtatccgggggatttccaagttcaccctcagttactcctcctagca
acccgaggaggtggtgtcttactcccaaacttcaggtgagggtatgactacaaaggagtt
gaggatcttccccatgaccagcaggaagggcagcaggactccagggaccttgctcttcac
gaggtagcaggtgagcacagccaaaggcagagaaggccagcttggactggagtgggcgtg
gccggagtaaaagggccaaaccaagcggagccaagacgagcttagactcaacggccccca
gcttgaaaaggaaagtatcttccgtagaattgttctgccggatacaagctccgggaagtt
taactatttggtgtttgcttccaaaccaaaccaaacaaacagaaaaccccgcggcgctgt
ggaaagcgcggaggccaggtgatcaccctatttccggcgggggagccggattggccctcc
tatgcagtgccggatgccatggcaaccagacacaagatgactctccagaactggcgccac
ctcccctgaggccttggccttgctgtcctccagggtgattgcctagtcaggaggggagag
gagcagccacacctctgcctgccgggactctgctctctctgcctagtaaaattccggtgc
ttcctaaatctcacgggccatcaagagtagcagccctgagaagttgggcgaagggaaaaa
aaaagcaaaaaacaaaatccaaaatacgctcaggggctatcaaggcactttgaatcaaaa
acttggtggcgactccagccgtgtgtaatcagcaagccaggggcttctctgtcgcatgct
ctaaatggcaagcctgctccacacagcgatttccctgattctggcccaaagtacaaccct
cctctttcttgagctcagatgttctcaatgggtccttattgaagcagaatcaagccccga
gcctctccaacatccaaggcatttcacaacgttaccttctgggagactctgcccgtgact
catccagacagtcaccagcttatctttcctgaaacgcgtcctgtttccaggcttgtgttc
ttgctgtttcatttgcctggaatttccagtctttccttctgattcccttttgaccaagat
ttgaagtttcccttccaggaaatcttcttggaatgcttccagcttcctggaagttccaag
tctatcccctcagcccagggaTGAGCACTGATAGCCGTTGG
Primer
(+)TCAGTTCCGAGACCTGGGAT
(+)CCAACGGCTATCAGTGCTCA


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