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Mouse element [ mm2134 ]


Position: chr9:63,742,796-63,747,417 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Smad3 - Smad6

Timepoints:
e11.5

Staining on skin in various parts of the embryo including face.

Expression Pattern
forebrain (2 out of 3 embryos) 
hindbrain (rhombencephalon) (2 out of 3 embryos) 
midbrain (mesencephalon) (2 out of 3 embryos) 
other (2 out of 3 embryos) 
tail (2 out of 3 embryos) 

Embryo 1

Embryo 2

Fasta sequence
CCAAGAAACTCGATGCCCCTaatcagcaggaagtagtctatcaataatgtcacccctttt
ccaacgcctgactttcttcacgggtctcattcctttctctctatccttttttctctcttc
tctagtgtaatggggctggaaggctggaagaaaaggggtggagaagggtggaagaaagaa
gaacccacaaggtagccaaagaccagctacgagtgtgcccagttcttaagcatgaacttt
gtaggtgacaaattcatgttaacatgtctgttgcaaggttggacccacctggtaggcctt
gagtatgggcctcaggcttcagaactggctgtgacttgtgtcatttcccagttgccggct
tatctcagatggcttctggagctgagatagaaggcaaggtgccctgggctgatttacatg
gtcaggtcaacaggcagatggagggcaaacgctgtcagggtgctgagtagaaagagcttt
ccactcccttctcctgctgcatcccacctcaaggtctacataggacttcccagtcagtac
tgccggcgaagacagaaggacaaacagattcacagacgtgtgccacacagcaggttttaa
cgccccgacaactctccctggtctttccttgtctccatgtcatcatggatgctgtgaaac
tcctgtgagtattggttactaaagctcaaagatgccttcaactgcaaaaatcccctctag
cccagtcaaaacaaaacccacctcaactggcagtatcagtgtcgaccggcaaagatgggg
tctgagtgagccttggaggtagagggggttggggtctgagagggaaggggactagagtgc
cttggtccttagcacacgtcacagggaacactctgcaggaccccctccttgtgtgtctgg
gatggggcatgtgtatgtgttgcggggaggggggctgtgcacatgtgtgtggaggtcaga
ggtcaaccctgggtatcacttcacttagtcaccagccaccctggtcttttgtttgtttca
ttttggagacaggttctctcactcaccccagactcaacaagtaggctagattgacacggc
tggcaaaccccaggatccatttgtctttgactcctcagtggtggaagcatgcaccagctt
gttttggggtgctggggattgaacttgggggccctcatcctcacaccttactcactgagc
tatctccccagctctctgtggggcccctttcattagacatccctctattcaggacatcta
gaccctccatgaacatgtgagcagtttactgtgcagcagctaatgccaggccagggactt
agtggctcctagcggggacaagaccctgtgcttccaggagcgagtgtgggatttcagatc
tgtaatagggttcacctctacaggagaaaaggtcggaaccctggcaaggactgagccaac
gttcactggaaacaagagccctggcagaagtctccactgagagagcagagcgggctgaga
aaccgctgagccctgccaagccctctgtggaagcctgcacattcccgggcagcatgcttc
aaatactttccgtggtttcacccctggagggttagaagaatctgcagttatgactctggt
ctgcaaaaacaatttggctagcgggcagcagcgacttcgcagggggtggaaagtctgagt
cgttggccccaggaatgtgcaggaggagtagggggcagtggccactacttccccctaggg
cgtcagcctaggaggttcctaatcggtgaaaacgtttgctgtgtaacctactaagtgcca
tcctgtgcacactgaggatctagtgtggtgatctgaggaaggtgacacacaggcgtgtgt
gtgtgcatgtgtgtgtgtgtgcatgtgtatgtgcatgtgtgtgtgtgtgtgtgtgtgtgt
aggccggtgtgtgtgtgtgtaggccagtctgtgtatcacatggtacctggcacctgagga
ggtcagaggagggcatcagatccttgagccaccatgtgagtcctgggaactgaacttagg
tcctttgtaagaggcagtgcctctctctctctctctctctccctctccctcctcctcctc
ctcctcctcctcctccttcttcttcttctctctctctgccacagaaaccaggctctcagc
tggggctcttactactccctcccatgccccagccccaccccatgtttgtcccctcttacc
cggtttgagaaccctttgggggcagacactcgtgccctgaaatggagtgggatggctcaa
atccctgacgctcctggctacctctgaacagaccctccaacgcagcccctgaggacctcc
ttccggtttctggcacacagcaggtgctccacctgcagaaggtgctcctctcacagagac
taggcagtttgtggtgtggctgtgtggtaaggaacaatctctatagtttcttcaggccgt
ttcctcatgtaaaatgccctctgaggggccagagtgatggctcagcagttaagagcacag
actgctagtgcccaggaccagagtccaccacccagcacctacattgctcagatcataacc
aaccatttgtaacttcagctccaaggaatctgttaccgtcttctggacctgcacagaatg
gcattcacatgtatgcccaacacagaaacacatgcaaatacacatattaaaaaaaataaa
atgggctcaggcaataaagtatttgctttagagtcatgaggacctgagtttgatatcagg
actatatggggatgttggattaacttttcctggaagaataaatgaataaataagtgaata
taaatgaagttgtgtgtgctggttcttgcttgtaatcccagcactaaggaggtggagaca
aatggacccccatgggcagcccgtctaatacttgatgaggcccacaaagaaatgctcgaa
tctctaaatgatatttcccaccacttaagatcttagtaattagttcatctcatccctcgt
tctgaaacataaaggtaattgatttctaacatgtaataaagtgaagtcggcttaaaaaaa
aacaaaaaactgttgtcaatacctgaaatcagataaaattttaaatgttaaaatttaatt
tgggggtggacgacgtggaagttgctggctgaccaggcttggaggagtccgcttcagaac
cggagtccgggagcagcggaggtggcagcgcccaggctcaactaggactcgctgccgagt
cccgacctgtctctgaggatcggcggcggttcatcatgggtggctttttctcaagtattt
tttccagtctctttggaaccagagaaatgaggattttaattttgggattagatggtgctg
gaaaaacaacaattttgtacaggttacaggttggagaagttattactactattcccacta
ttggatttaatgtggagacggtgacatacaaaaatctcaaattccaatttgggacttagg
aggacagacaagtatcaggccatactggagatgttattattcaaaaacagatgcagtcat
ctatgtcgttgacagttgtgactgagaccgaattggcatttccaagtctgagttagttgc
catgttggaggaagaagagctgagaaaagccattttagtgatgtttgcaaataagcagga
catggaacaggccatgacaccctcagaaatggcaaatgctcttgggttacctgccctgaa
ggaccggaagtggcagatctttaaaacttcagcaaccaaaggcactggccttgatgaggc
aatggaatggttagttgaaaccctgaaaagcagacattgagcccattcacgtcagcgctt
gtgaaccaacgctacatcacatactcattggaagcagtcaggtgtgcttcctgtgactgc
tggagctgtgcgattctggcgtatacagacctgcctgacttcaatatttgtaataaatat
aaaaacaagtatttggtgagagggttagcttgattgaatcacccaaatggtttatgtaaa
atatttcttcctggttttcatgtgttaaggtatatattctatttgtatggaattcttact
cagataaagttctattaaagaatgtatactcttagggggaaccctcctatttttaaatta
gtggttgcatcttgtttgtataaacactaatatttagctcagactctttcccccttaaaa
tgaattaaggctttccaaagattagtcttagcaaagtagattagaaatacagtgtataat
cttcatttgcttaactgactagtttattttgttggctcactttactgacttatgttattt
tacagtacttatacttgtcaaaagaattttgtgtgtgttgatctgaactttgtacaggaa
ctctgtaaggaaggtggggttctgctatgttgctttgccaggccctatacagtgaggtag
ggtagggttcagagtcaggcttgtgggtcagaaacttgtgtcctaaatcatactgtctcc
ggatataccaacactgggaacatagacacctaggtgtggtggcacacacttgtagtccta
gtactcaggagacagaggtaggaagacccaagagttcagcttTGTGGTGAATCTGAGGCC
AG
Primer
(+)ccaagaaactcgatgcccct
(+)ctggcctcagattcaccaca


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