Mouse element [ mm2131 ]Position: chr9:63,702,923-63,707,671 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: Smad3 - Smad6 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence CTTGGGAATCCTGACGCCTTgagtacctgggatttcccctcaaaagcccctagtaatgta tgtcagggtctgtttctgagtacttggctccctcctcatggctgtcttgtccaagtatgt gtgagtatgtgtgtgagagcaatgatgagtaagcttgtgagtgcatgcatgggtggggaa cacaagtgcatataactgtgtgaatgggttcagagaatatgagtgtgtgagctggtatgt gtgtgtgtgtgttgtatgtgagtgtgggatgcatgagtgtctgtgtgtgtgtgtgtgtgt atgtgtgtgtgttgtgtatgtgagtgtggggtgaatgaatgtctctctctctctgtgggt gcatgagtgtgtgtgtgtgtgtgtgtgtgtgtggtgtaagtgagtgtggggtgaatgaat gtctctctctctctgtgggtgcatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgta agtgagtgtgcggtgcatgagtgtatatgagggtgaagtaaatgtgtgtagaatgattat aaatgaacacacgtgtgtgtggatgtgtgatggctggggatagagactgtgtatgtgcat ggaagagtataggagtgtgtgtagggagttgttagtagaagatagtgtgcataaatgtgg ggtgagattgtgttcatggtatatgtgcaaatctcactgtggagtgagtgggtgagtttg tgagcatctttgtgtgagtgtatgtctgagagtgtttagagtgtataattatgtgtgtga gtgtatagatgtaagcatgagtatgagtgtgtgcgcacgcgtttgtgtgtgtgtgtgtgt gtgtgtgtgtgtgtgtgtgtgtgtgtgtgttccctcccagtcaggagccttaggttctct gggcaggaactagacatcctgccctctgttgtacccgccgtggctttttctaagtgacac actcaacagctttgggtcttccgcccagagcactgagctctgagaggctccactgccgtt tccatcttcccactttgcctctgtgtcggagctgattattctttggaggacttgtgagcc caactactaatcaaacagaaatcactaaggctgtacacagttccacagtgccaccctcag cccaaggcatcatggaccctcctggaggatggtctagctgccaaagggacagaactgttt aattagaacaacttggattggaaacattcatccatgtatggggaaaatggcgacagactt tttaggacacgccataagttttacagttattggattttttcaacttgtttacaaaagcaa tattgtgaaatggccaacagccaggcccagttgcttttcttcctgctccttctgatgaca ggagggtgtattatcccccagccagctggggggaggggcgggcgcccacatgccatcttg ctgtctgtttaattatccattcagccaggctggcactggagctctctctgagctactcac agccagttctgttctggaatgtggcacagcgctccctccccacgccttgggccccctgca gcagcctcaccccaacaacatgccaactcccagagccagcatgaccttgaacttgactgg aaacatctgggccacaagtttctccttagtcataaaaagcagatctctctctctctctct ctctctctctctctctctctctctctctcacacacacacacacacacacacacacacaca cagtgggttctgcaccagaccatgaggagtccctgagggaagctttaaaacataaacctt gccatgcctgacccttccaagacaaggtcgggggatccttgaacttttaatctgtccatt atttattgagggctatatggtggcatgcatgtgggagatcagaacgtaacttgtgggagt tggttcttcccctccaccaggtctcagggatgagactcagactattagacttggtggcaa gcaccctgaccttctgggccatcttgccagccccagcctgaatctttgaaagctcttaag tgattctgctactttgtagcagggtcggacatccattggatttggtgtctctggcaggct ttaccctgggactccacagaatgttgccccatagagagtggggaccagagttgccccaca gagagtggggggtggggaccagagctgccccatagagggtgggggtggggaccaggtctg cgctctgtcctcactccggctctgatcatctggcaaagcttcattaagtacaaagtcacc tggagaaacatccccgtgggcaggctccagaccacacctgtaaattgtgggggcaggggg tggggtaagaggggggaatgtataaaatgcaggtgctaagatagccttcccatggtgcac ctgtactggcctagctatgggagggaaagcatcttcagctgaagaggaactggcggctgc tctggcctgactgaaggatgcagagaaaaaaagcaaggacagagagttcaaggtgggaga cctggccaccaacagtcctggcttgtccccaggagaccataaaagagggaccaggagctc ctgcattcaaacttcttccatagttgaagagagtatagtctcaacagggcataatcacac tgacgctggcggcctcctttccagcactatgacaaatacttgagatttgaaataaagtcg tacggaagaaaggtctgtcatggctcatggtttcggtttcagtgattttgggttggggct tcttagcctcgtggacatttgggtctgtaacgaggctcacatagtgggaacacaaagctc acatagtgggaacacatagcagaaacaaacaaacaaacaaacaaatggcttcctggcaga caggaagcaaaatagacaggaagtgccgggggtactgccattccctttaggtgcttatat tcttagtaacctaactttctcctaccaggcccacctcttaaaggatccacgggcggtaac caagcctccaacactcaagatctaaactatggcaaaggtttaacctctctgagacacttg acagtctgtcataccttgtgtgtttgtgtctataggttgtagaggttgggcattgccaac aatgtcatcacaggcctggagagactgcttagcagttgcaagcacttgccattcttgcag aggaccacatgccagcaaccacatggcaactcgcctgtctgtattctatgggatctgacg ccctcttctggcctccattggcactgaatacacacagtgcacatacagacaagtaggtac acacacatacaggtaaaaataaataaatctgaaggaggaggaggaagaggaggggaagga gaggggtcgattatatcaactgaggagtgtgcctgcacagggctggatggcttgaacaat gtcactggactgctcagcaggggatccaggcttggctctcagccttctaacttcctagga catagccctgtgggcctctatgcacacatacacatggagcctgcctctttcttagagtgc ttctatatccagggctctaccaagtccctgaagcaaggagcataactttccggttctcag tagatgttagaaattcaagcctctgaagacttaaagtgaccaaactttgtcaatcagacc tgggctgtgggtgagaggcaggaaaacaatataaggcttgaaacaagattgtagcctatg gctgtgatgtagattctatattctatcatctgtaataagaaatcatttgaagaagatttt atgtttattctatgtgttgagtgattgcctgcatgtttgtaagtacatcttatgcatgca gtgtccagggacaccagaagaaggctttaaacccctggaactagaattacagaacgtagt tagccaccatatgggtactgggaatcgaacctgggtcctctgcaatagtaagaagtgctc ttaaccgctgagccatctcccaagctccaaggaatcactcttaaaaggcaaaacaatcta ttttaatacaaatacacaaatgtcttcattccttttctaatgctgttaaagagacaccat gaccaaggcaacttatagaaggtcgggttcactgggctttgagtttcagagggtgtgtcc atgactatcatggtgggggaatcatggcagctggcaggcaggcatgacactgagaagtag ctgagagcttacatctcatctgagagagagagagagaaagagagaagagaagagaagaga agagaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaaggga agggaagggaagggaagagaagagaagagaagagaagagaagagaagagaagagaagaga agagaagagaagagaagagaagagagaagagaagagaagagaagagggagggggaggggg agggggagggggagagggagacagaattgagaatggcatgggcttttgaaacctcaaagc ccacctctgagacacaccttccccaacaagaccacacctcctaatcctttcctaacagtt ccacaaactgcagatcaaccattcaaaaaataaaagtctatggaggccattcccattcaa accaccacacagatgaacaggtatcaaaactattttattgaactcactaattaactagaa aactagtaaggtgttaaaattggttcaaataagaattccaggaacacagGCAACTGGAAA CGGACCAACPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.