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Mouse element [ mm2131 ]


Position: chr9:63,702,923-63,707,671 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Smad3 - Smad6

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CTTGGGAATCCTGACGCCTTgagtacctgggatttcccctcaaaagcccctagtaatgta
tgtcagggtctgtttctgagtacttggctccctcctcatggctgtcttgtccaagtatgt
gtgagtatgtgtgtgagagcaatgatgagtaagcttgtgagtgcatgcatgggtggggaa
cacaagtgcatataactgtgtgaatgggttcagagaatatgagtgtgtgagctggtatgt
gtgtgtgtgtgttgtatgtgagtgtgggatgcatgagtgtctgtgtgtgtgtgtgtgtgt
atgtgtgtgtgttgtgtatgtgagtgtggggtgaatgaatgtctctctctctctgtgggt
gcatgagtgtgtgtgtgtgtgtgtgtgtgtgtggtgtaagtgagtgtggggtgaatgaat
gtctctctctctctgtgggtgcatgagtgtgtgtgtgtgtgtgtgtgtgtgtgtggtgta
agtgagtgtgcggtgcatgagtgtatatgagggtgaagtaaatgtgtgtagaatgattat
aaatgaacacacgtgtgtgtggatgtgtgatggctggggatagagactgtgtatgtgcat
ggaagagtataggagtgtgtgtagggagttgttagtagaagatagtgtgcataaatgtgg
ggtgagattgtgttcatggtatatgtgcaaatctcactgtggagtgagtgggtgagtttg
tgagcatctttgtgtgagtgtatgtctgagagtgtttagagtgtataattatgtgtgtga
gtgtatagatgtaagcatgagtatgagtgtgtgcgcacgcgtttgtgtgtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgttccctcccagtcaggagccttaggttctct
gggcaggaactagacatcctgccctctgttgtacccgccgtggctttttctaagtgacac
actcaacagctttgggtcttccgcccagagcactgagctctgagaggctccactgccgtt
tccatcttcccactttgcctctgtgtcggagctgattattctttggaggacttgtgagcc
caactactaatcaaacagaaatcactaaggctgtacacagttccacagtgccaccctcag
cccaaggcatcatggaccctcctggaggatggtctagctgccaaagggacagaactgttt
aattagaacaacttggattggaaacattcatccatgtatggggaaaatggcgacagactt
tttaggacacgccataagttttacagttattggattttttcaacttgtttacaaaagcaa
tattgtgaaatggccaacagccaggcccagttgcttttcttcctgctccttctgatgaca
ggagggtgtattatcccccagccagctggggggaggggcgggcgcccacatgccatcttg
ctgtctgtttaattatccattcagccaggctggcactggagctctctctgagctactcac
agccagttctgttctggaatgtggcacagcgctccctccccacgccttgggccccctgca
gcagcctcaccccaacaacatgccaactcccagagccagcatgaccttgaacttgactgg
aaacatctgggccacaagtttctccttagtcataaaaagcagatctctctctctctctct
ctctctctctctctctctctctctctctcacacacacacacacacacacacacacacaca
cagtgggttctgcaccagaccatgaggagtccctgagggaagctttaaaacataaacctt
gccatgcctgacccttccaagacaaggtcgggggatccttgaacttttaatctgtccatt
atttattgagggctatatggtggcatgcatgtgggagatcagaacgtaacttgtgggagt
tggttcttcccctccaccaggtctcagggatgagactcagactattagacttggtggcaa
gcaccctgaccttctgggccatcttgccagccccagcctgaatctttgaaagctcttaag
tgattctgctactttgtagcagggtcggacatccattggatttggtgtctctggcaggct
ttaccctgggactccacagaatgttgccccatagagagtggggaccagagttgccccaca
gagagtggggggtggggaccagagctgccccatagagggtgggggtggggaccaggtctg
cgctctgtcctcactccggctctgatcatctggcaaagcttcattaagtacaaagtcacc
tggagaaacatccccgtgggcaggctccagaccacacctgtaaattgtgggggcaggggg
tggggtaagaggggggaatgtataaaatgcaggtgctaagatagccttcccatggtgcac
ctgtactggcctagctatgggagggaaagcatcttcagctgaagaggaactggcggctgc
tctggcctgactgaaggatgcagagaaaaaaagcaaggacagagagttcaaggtgggaga
cctggccaccaacagtcctggcttgtccccaggagaccataaaagagggaccaggagctc
ctgcattcaaacttcttccatagttgaagagagtatagtctcaacagggcataatcacac
tgacgctggcggcctcctttccagcactatgacaaatacttgagatttgaaataaagtcg
tacggaagaaaggtctgtcatggctcatggtttcggtttcagtgattttgggttggggct
tcttagcctcgtggacatttgggtctgtaacgaggctcacatagtgggaacacaaagctc
acatagtgggaacacatagcagaaacaaacaaacaaacaaacaaatggcttcctggcaga
caggaagcaaaatagacaggaagtgccgggggtactgccattccctttaggtgcttatat
tcttagtaacctaactttctcctaccaggcccacctcttaaaggatccacgggcggtaac
caagcctccaacactcaagatctaaactatggcaaaggtttaacctctctgagacacttg
acagtctgtcataccttgtgtgtttgtgtctataggttgtagaggttgggcattgccaac
aatgtcatcacaggcctggagagactgcttagcagttgcaagcacttgccattcttgcag
aggaccacatgccagcaaccacatggcaactcgcctgtctgtattctatgggatctgacg
ccctcttctggcctccattggcactgaatacacacagtgcacatacagacaagtaggtac
acacacatacaggtaaaaataaataaatctgaaggaggaggaggaagaggaggggaagga
gaggggtcgattatatcaactgaggagtgtgcctgcacagggctggatggcttgaacaat
gtcactggactgctcagcaggggatccaggcttggctctcagccttctaacttcctagga
catagccctgtgggcctctatgcacacatacacatggagcctgcctctttcttagagtgc
ttctatatccagggctctaccaagtccctgaagcaaggagcataactttccggttctcag
tagatgttagaaattcaagcctctgaagacttaaagtgaccaaactttgtcaatcagacc
tgggctgtgggtgagaggcaggaaaacaatataaggcttgaaacaagattgtagcctatg
gctgtgatgtagattctatattctatcatctgtaataagaaatcatttgaagaagatttt
atgtttattctatgtgttgagtgattgcctgcatgtttgtaagtacatcttatgcatgca
gtgtccagggacaccagaagaaggctttaaacccctggaactagaattacagaacgtagt
tagccaccatatgggtactgggaatcgaacctgggtcctctgcaatagtaagaagtgctc
ttaaccgctgagccatctcccaagctccaaggaatcactcttaaaaggcaaaacaatcta
ttttaatacaaatacacaaatgtcttcattccttttctaatgctgttaaagagacaccat
gaccaaggcaacttatagaaggtcgggttcactgggctttgagtttcagagggtgtgtcc
atgactatcatggtgggggaatcatggcagctggcaggcaggcatgacactgagaagtag
ctgagagcttacatctcatctgagagagagagagagaaagagagaagagaagagaagaga
agagaagggaagggaagggaagggaagggaagggaagggaagggaagggaagggaaggga
agggaagggaagggaagagaagagaagagaagagaagagaagagaagagaagagaagaga
agagaagagaagagaagagaagagagaagagaagagaagagaagagggagggggaggggg
agggggagggggagagggagacagaattgagaatggcatgggcttttgaaacctcaaagc
ccacctctgagacacaccttccccaacaagaccacacctcctaatcctttcctaacagtt
ccacaaactgcagatcaaccattcaaaaaataaaagtctatggaggccattcccattcaa
accaccacacagatgaacaggtatcaaaactattttattgaactcactaattaactagaa
aactagtaaggtgttaaaattggttcaaataagaattccaggaacacagGCAACTGGAAA
CGGACCAAC
Primer
(+)CTTGGGAATCCTGACGCCTT
(+)GTTGGTCCGTTTCCAGTTGC


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