Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs2131 ]


Position: chr1:227,014,699-227,016,924 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: ITPKB-IT1 - PSEN2

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CCTCAGCTTTTACCCAGCACcatcaaagcaggacgcactgcacaaacctgaacattagct
gttgtctagctgccggagtatgcctggggaacagtcacagttgttgcagctacacagcat
gtgtgcgtttgtgagtctggagttggagttgagtgagaccctgatactagggaaagagac
ggaaagccagactcttacttaagggcttctatcgcaggagggaagatttcttccaagagc
tcagtgcaataaatgaaagaaatttagaaggctgccaggctcagggcagccccggagcat
cagaagtaggaggctgagggtcgggaatggggagcaggggttagaactgaggaagcaggg
gttagaactgaggggttgctgaagacaccaccacgtttcagaactcaggatagggcctgc
ctggggactcgcacagaggagaaggaaccggtagtctaaaatactaaaacgtgtggaatt
cctgcatggaggcttcctactgggagtgtaaaatttctgtgagaactgtaagaagtaagc
aaacagcatcagaggacatgagccccgtggaaagtgcctcaaagtgtggtttgaggatta
cccgcctgagactccaaagaggtgtttgccaaaaaaggcagattcttgggccacacccgg
ctctatggagtgggaagcgctgagggtggggcctgggcgcctgctctcagaactggtgcc
gctgaaagcttgcagagcccaaacgctgcgaggaggtcgcaccagcaagtgaggaagcag
aagggatggcttcctgcgcctcccacacaattttcaacttttcaggaagtaccataggag
aagtcaaggtagatgaatacgtttttctttggtccctagcatttttcttttaaaatttta
ttttccttttgaaaaagaatgtgagaacaaagtctgagaacgaatgtgagaacgaatctc
gaaacgtgagaaaaaggccttcttccccccctccacctcccctgcgtggtccttgggtgc
tctgtgaacggtgaccccaccctcacagggaccctgactcctgaggggtcaccactcata
tcctgtgagagactacgctattccctgattcagcggggtctccaggtctgaacgcccaag
gccaacacagaggcctaaaaatagagcccgggaggcccagtcaaaccggaagagagccag
aggcctccctggagtcccgaagacgatctgaaccaaggagcccagcgccctctagcggga
gacaagctgcttcgcggccctggtctccggtcagaggcactgggctggggctgagcactc
cgaggcggaaaccaaagggtgtgcccctggggacaccgcctcaagacccctgactgaggc
tccaaaaggaaaaattgtgccacttgtgttttacgaacttcaacgtaattgtaggataca
ttgctgtaatgtataatgttgtaataatgattaccttctataaccacagatttttatatt
tatttatttatttatttttgagacagagtcttgatctgccacccagtctggagtgcagtg
gcacgatctcagctcactgcaacctccgcctcccgggttcaagcaattctctgcctcagc
ctcctgagtagctggaattacaggcgcctgccaccatgcccagctaatttttgtattttt
tgtagagacggagtttcaccatcttggccaggctgctcttgaattcctgacctcgtgatc
cacccgcctcggcctcccaaagtgctgagattacaggcgtcagccaccgcgcctggccga
cttttatttctttacttatttacttatttatttattttctgagatggggtcttgctctgt
cgcccaggctggagtgcaatggcgtgatctcagctcactgcaacctctgcctactgggtt
caagtgattctcctgcctcagcctccccagtagctgggattacaggcacgcaccaccatg
cccggctaatttttgtatttttattagagataggatttcaccatgttggccaggctggtc
tcaaactcttgacctcaggtgatccaccctccttggccttccaaagtgctgagattacag
gcgtgagccactgcccctggcctagcatcacagactttagacccttttcattacttctca
gtgagaccaaggttcctatcactaaattcacatgcacataacatatAACCTGGAAGGGTA
CCCAAG
Primer
(+)CCTCAGCTTTTACCCAGCAC
(+)CTTGGGTACCCTTCCAGGTT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.