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Human element [ hs2128 ]


Position: chr1:156,065,479-156,069,043 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LMNA(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACTAGGCCCTCTTCCAGCTCccccaggagtctgggggttagaggtcaggctgctccccac
tctattacctccccacacttctaattaattcttgtgttcagtcccagaacctggagagtt
acactcaggctgcctggtcctgcttattgcccatatcctagaggcacttgcatgcccttc
caggcgggtaactgtacatgtctctcccaggcagccttcacagactactcaggggtatgg
attggctccagctctgacactcagacctgagcagaggcgtgatctactctggcctcctgt
gtttctgtgccccaccttcccacactgcccagggctccctgagagtgatgctgagtctag
tctcagcttttatgttgctttgcttttgacctctgacccaacacatgcctcctttccctc
tgaagtcttgattttctccctggcttttctccaccttctgggtgttcctttttggccttc
tttgcccatctctcctcctctgtctacacagccaggggctcccccttccgtttcctctgc
ctggaacacacttgcttctccctttctgactggctattcaagcaggatcctgtaggtggg
tggcagtgcactgtgtattacctgtgagccctatgcaaattaccgcacatctctgaacct
gttttcccatctataaagtgaagctaatagtagcaattacctcatgggattgttgtgcaa
ttagtgggaagaggcatgtaaagtactgacatactgtctagtacacagaaagtgcttaat
aaatgttggtgattattatccaggactcagcttaatcatcccttcctcaggcaggcctgc
cacacaaccgcagaccgggttaggtgccgggttttctgctccccagcgtttggaggcact
catcacacattaattactttatccatgaagatgaaagctgtctttggcacccagatggta
ctgagtaaatatctgtgaatgaatgaatgatgtggaatgtctcctctggaaggacacagt
cagggcctcctgccactcaggactagcctggatgcacccacagggaaggagaaggtgggg
ctggtctccgctgggccagcaggtggcgccagggcctgtcggtctctccccttggccacc
tcccttgcgcttgctcatctcatgcccaggcgctgagggttctcagctggggcaggagag
atggggtcctgaggcctgggtgaagttccaagccctggggctcgggggcagactctcgct
cacccctcccagaaagatgttttcctaggggatgtccagcctaacacggcagggaaggaa
gtggtggtcacctgggaaaggggccaacctgagaggttgggggtcctgatgaggctgcta
ttctcttgaggacatgaaatgagaggcggtgaagtcagtcagtgagtcaaaagctgagat
ctaggaaccagacacaatgtgggagaagctgcggtgaaatcaatcagtgagagaggaagg
ggaggcccggtttccatgacaacggtagtgtttgtggcaagctggggactcctgggtccc
cagggcccgcaagcagtgattcaccacaggaaagggaaggctgcagagtgacctggtgct
ggggaccggatgccttgtggctccttctcactgctgagcatgcattcccccagcccaggc
cttggatctctgctctgccagctactggcagggaaactgagggatggcagaactgagccc
caataaggggcaggcgctttgctccacgccgtacatgcacatatcacttatatcacttat
tgctcacaacagtcctatggaattaccgttatccctgttttatcaaagaggaaactctca
gcctggcccacggtgccatgggcaggacatgagtggcagagccaggattggaacccaggc
tagcctgactctttaccatgcttgggaaggcccagaaagcagaaaaggaagagcaggagc
atgagagttagaggatggttcagaccccagaggagatggaccccaaggcccctagcctcc
ctgcctgccctgccctatgcgagcccaacactgatacggaggaaagctggccaactgcat
ggcctaatgtgggccagaacctgggcagccagcctacctctcactctcctccaagcccaa
gagagtaggccccagttccagtccatccaactggatggtagctcccccaccgttttctct
ctgccctggtcctaggggcaggggtgcgtgtgcgtgtgtgcgtgcgtgtgtgtgtgtgtg
tgatcatcatgtctacaccacccaccaccatcacccctatcctccagcttctgctatagc
ctgggagttcccagccttttagtccctgtcaggatagtttcattcttgttcagctttggg
gcccacacaatttcagtacaaaaggggtatgcccatctcaccctgggccttgatagcatg
caagagcatagttcaggccctcatcatctattcccttgtagtagaagggatggaggttgg
aaagaccttagaaatcttccagtctggttctcttgttttgaaggtgtgaaagctgaggct
catagaaggggagcaatttttctgaggtcacagagcaagttaatggaagagtgaactaga
ttccctgtccacagacttcaggttctgtaatcccagaaaggacttcttgaatttggcatt
gagttcttaggatgggagtcaggtagatgaacagatggagtgagacagatgaaattggat
aacctagcataaaatgccatgtgaaaagaaggtacgcaactcatggcccgactgtctacc
atgttacatcaggaataactgaggtgagatcatgggaaagacttctcacatatgtatgtt
aggggtacaagatctgtggtcaaaatgggctgtgtgatcccagacaaatcacttaccttt
tctgagccccagtggtaactcaggataccctacctgcaggcttgtggagaggatggaggg
ggtggtgggagagtacttgtgaactgtggggtgacatgaatgttgtcagttgtcagggaa
ggcaagtcatgtctagtgggactgagatagagctaccctgcagtgcaaaggtaaggggta
agccatgatgctcacccctcccacccccatccttgggagagaaagggaggaacataaact
tccagtatgcttgatacaagcaacagttctccctgggggtgggcagcaggttcctgtaga
cccctggggtgcccagaggctgtgggaagctgagcactaattagctctggctttctaatc
gggcttaattgcctcctcatgatgggcaattaggaagctgcatcaattagcacagggagg
tgacaactcagctggggttggtcagggctccccgttggcagggagggaggcaggcaggca
aaggctgccccactgtcagccccttccttccctttgaaggagagggccctggagccctct
ccttagcaattaggccttagttccttagctcctaggagctactagccttctaggcctgga
ttgtgGCTTTTCTGGCCTTGGTTTA
Primer
(+)ACTAGGCCCTCTTCCAGCTC
(+)TAAACCAAGGCCAGAAAAGC


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