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Human element [ hs2127 ]


Position: chr1:156,059,426-156,062,550 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LMNA(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACTCGGAGGGCTACAGAGGTtgggggagagaggtcactgtgagtccttctgttgttgtgg
atctgatctccaagggctttgcaggctcagcctaggtttggagatggacaaacgtctctg
cttctcccctgggactacactggcacttcctctgccaggtcccctgcattgtctgatttc
cccagggagagtagctcagaggggctggggtggagtctgggccccttaggacagctggtt
gatgaggcccctctgggacttagggctggacccaggcgtccaggaggcgggtgatactgg
agctgtgacagttggtccccagattccacacccagtggcgccagctctggtttcgagctg
cggtgagggagggggaggggcacctggtgccagccaggggctggatgctgtcttggggca
gggagggggaggcagtaaacatgtccttcctaggttgttgaggattttctaattgccctc
tctgtgccaggcactgtgcaaggtactaacgagattctgcaatgcaagatgcagtctggc
acagatgaattgacagcatacagtatagaattagaatgtcagagctggactagaagttga
atgaatgaatgagtaggggaatgagtgaatgaatagttcatcagttacctaatgcactca
ttttacagaggagactgaggcccagagaacccgagtcctgtgactcccttctgctttctg
atctgtcatgcttcctttttcaggaaagggaagcaaaaggcagagagaggggtgggaagg
gacttgacgtttcctgagtgcatgtttggtgccaggctctgttctggtcttttcagactt
gatgtaattgtcttcacaattctgtgaagatggacttggtgtctctgcttcacatgaagg
gacctgaggttcagagaggctaagtaactttcctaggtcacagagctggtaagtagagac
tttagtgttcaaaaccagagcagtctgaccccagagcctgggaccccagaggtagacagt
gatactcagtgagtgcttggagcccacagagggtggagggagtggttcctggatgaagta
gatctgaagggtgggtgaggttcatttgaaaggcgagaattggaggcatgtctggaagtt
ggtgctggaggtgcccagggagacttgctggttgagcaggtggccggcttgcatggatct
tggggagcaggggacaggttcaaagaaacacatctttaaacattggccaccaggtggcgc
cgcaggccaattcctagaagcggctccagcctcagcgccctcactagggcccaggtatga
cttcgctgctcagccagggctccatgctcggcttgcttcctcaggtgtcatctccagctt
ccgcttgcccctggcttctggcatccaacacatgggggataatgatgctaccagtcgttt
cctgactcgggacgaacacccaggtagctgagacctgggaatccccgtgggtctgagcag
ctcccccggtcacccggagacccctccagtcgcctaaacctggcttcatgtccagcgccc
ttctgagtttctgggagacactgttcagaggacaggctgaggaaacaggcatttgagtcc
aactgacctgggtctgaagggaaataataatatctaccttgtaaggatttaaaacatttc
atctatggccaggtgcggtggctcacccctgtaatcccagcactttgggaggccgaggcg
ggcagatcacctgaggtggggagttcgagaccagcctgaccaacatggagaaacccggtc
tctactaaaaatacaaaattagccgggcatggtggcgcatacctgtaatcccagctactc
aggaggctgaggcaggagaatctcttgaacctgggagacagaggttgcggtaagccaaga
tcgcgccactgcactccagcctgggcaataacagcaaaactccgtctcaaaaacaaacaa
acaaacaaacaaacctttcatccaataaatatctatcaaatacatgctgtgtcaggaact
attctaggccctgaatacatcagagaacaagatagacaaggtccctacttgcacggagct
gatactctactggggaggaaggcagacagtagtcaagtagataatgtactttctggtagt
gatcatcactgcaaagaaagataagccaggatatgggggcagaaaggtttgaggtggcta
atttagaaaggatggtcatgctatctggccaggacaacatagtgagaccccatctctaca
aaaaaaaattttttttttttgagatggagttttgctcttgttgcccaggctggagtgcag
tggcatgattttggctcactgcaacctccgcctcctgggttcaagccattctcctgcctc
ggcctccctagtagctgggattacaggtatgcatcaccacaccgggcaaatttttgtatt
tttagtagagatggggtttcgccatcttggtcagactggtctcaaactcctgacctcagg
taatccactcaccttggcctcccaaagtgctgggattacaggcgtgagccacagtgccca
gccaaaaaaaattttttttaattagccaggtgtggtgagttgctcttgtagtcttagcta
cttaggaggctgagataggaggagcacttgagttcaaggttacagtgagctgtgatcgtg
ccactgcactccagattgggtgacagagcgagatcccatcactattcaaaaatttacaaa
aaggctgggcacagtggctcctgtctgtaatccaagcactttgggaggccgaggcaggtg
gatcacttgaggtcgggagtttgagaccagcctgggcaatatggcaaaaccccgtctcta
caaaaaatacaaaaattagctgggcgtggtggtgggtacctgtaatcccagctacttggg
aggctgaggcaggagaattgcttgaagttgagaggtggaggttgcagtaagctgtgattg
caccactgcactccggctctagacaacagagcgagactccatctcaaaaaaaaaaaaaaa
atgtgatcatgaaatgcccctgataaaagcaccatcttagttcccCGTTGCCATCAGATT
CACAC
Primer
(+)ACTCGGAGGGCTACAGAGGT
(+)GTGTGAATCTGATGGCAACG


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