Mouse element [ mm2126 ]Position: chr9:63,644,965-63,649,683 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: Smad3 - Smad6 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence GTTGTGCCTAGGCTCCATGTgtgtgcagaagccctcggagctcagaagagggaactggat cccagagaaccgaagttacatgaagtcgcgtgtaacttcaggtggctgtgaattgccatg tgggtgcttcgaactgagcccagttcctcaagggcagtgcatgctcataaccactgagcc cgtgcccctggcccgcccttcctgctcttttgttgaatgcactccattacccaacccctg agatctcttcctcctcatggcccccttccttataacttatacacgtgtgcatccatcgaa cacagttaggtctggatcccacatctgacaaaataacaaaaaaaacatgtgacatttgtc tttctaaagctggcttcctttgattaacaatgctctccaggtctcccactttcctggaaa tctcgtgacttcatttttatttgaatgaataaaattcccttgcgcatatgaaccacattc tctgtatccattcttctgctgatggatatctaggctggctctgtttcctggttgaatggt gcagcagtacacctggatacacaagtgtccccattatagcacttggtggcctctacaccc aggcgtgccagaaaagagttatgtcatagacctagtcttaattctttgaggaacctgcat actgatttccatattctggctccagcagtggacatcttgccaaccgtgtgcctgattcct cgtttacccacatcccatctttcctttcggtgaggacagccattttaactaggtcagcag gattcttttaaagcagttttagcttgggtttccttggtacttgaggttgctaaatactta aaaggtatattactggccattgagaaccgtctgtcttttagttgactattttacttcgtc gatgatttgtgccttagcgttggtttttgaagttctccacatgatttagatgttagccgt gtctggcacaccgctggcaaatgtcttgcctggttggtagtgtgcctctttgctgcttgt ttctttcgctacacagaagctttttaacgtcaggtaataccatctgtcttcccacgtgat cagagtcctttccggaacattcttaacctgtgcctatgttttcaagtatctcctgttctc taggagttatgacattttgggtctttaaggtctttggtccctcttgaatagttggccctg gctgatgccggtgtttagaaggtggatggagtcttgctagagaaaatgggtcactgggag tgagtcctgagtggttgttttatttttaattgttatttattttaagcatgccgtaacact catgaggaagtctgaagacaactgaccaaccagcctgccttcatcttaggcttcacagcc atcttatagtaaagacaaactaggttcattccagtctatgattaaatctgtttctcaagg actggacaatggcctacttgaaaccttaactacaaatagttttatactgcctgatccagc catgtctttgtttcagaagattattataaccatgtcgctataaccatgtctttgattcag gaggctgttatgaccaacttgttacacttatgttctgtttctgtaaccgcatcaatttgc ctgcctaatcccccatttggtaaccctgaactataaaagcccttatcttcttcatgtcca ttgctgatctcttaaatcccaccttttgggagagacagctcacgtacaccatgcttctat ttttttaagtttcttcccttgggatgttcaccagacacacactggacaagaaaggatgaa gcaaaatccaaaacaggtgggtcagaggatcctaggggtggggtggggagggtctccttg gaagatttcagggttatagcccttcaatgttacagctcttttagaaaatagctctcttaa acaagagtcagcagaaaaaaacttgtgtatgcacacttaatttgtgatgaatcaagggct atatatatgacccttggagagtgggaaggggttcttcttagggtgaagtttcattgagga tgctgaggtttaagtttctgaggatgcctcatttgcatggagaggcattccaggaagttg aacctgtaattacatgacactcctcaggtagagactgacagtcagtttcccctgatcagg cagagaagaagccctgctaaaaaaagggagtccttcattttgcacgaagctcaggaaagc tgtccagacatggtagattacaaccttggtagtgaggtacaagagtacatacatttaaaa agcttgctttaaatggtttggccacgatgatttgggttgatggcccttctcttctcacct gtgggagtaacacaacttgcctaggtctgcccttccatccacgtgggtccaagggattga actcaagccatcaaacttggcagataggcagctttacctgctgaaccctctcgatagccc cagccttgaggtcttatagccctacccatcttcttcttcttttttcttttttctttttct tttcttttttttttttttttttttttttttggtttttcgagacagggtttctctgtgtag ccctggctgtcctggaactcactttgtagacgaggctggcctcgaactcagaaatccgac tacttctgtctaccaagtgctgggattaaaggcgtgtgccaccatgcctggcctctgccc aacttcttgtttactgtttattcctgactacagacacacaaggaaaaggagaaagagaga aagagagggagggagggaggaagaaagggagaaaagagagagagagagagagagagagag agagagagagagagcgcttgagggcaagcaggtgggcaggcaggcgttcctgtctgggtc tgtggccctattacagcagggacctgtgttgatgcccatggtctgcattaatgctaaagg ccgtgtgacgtctctggtctggactgctacctgagaccatgttgatgtctgagagccaag ctgagctggccccaccccccctacccactaccccaagatggtgccagaaatgcaggagaa ctggtcaagaggtagtccagccggctgcctcatgtgcccttgcctgggcaacccaggaga gctagccctggtaccagggcacaggagaccctgtaggctgacaaacatggccaccaccta ggcccagatccagggttttgatttggctcacctcaacatctatgccaactatgagctcct ggaacccatgaaagggtcctgcagacccaaagctgcagaagctccatgacacagggcaac aacacggcatctgagaggagtcccagtgaggatccagtattgtagcagaagccagaggcc tcaaaccagaccaatgattcatggcaatgagtgcaagaaaagctgttttgacaaaagggc atactgtgtgacacactgcgacacactgcagcttccacagtgagattttaaaaaaaaaat cattgttgttatttatttccaattctttctactttctagccctggaatagtggcaaatgg tgtgttccagctttctgaatcggagctgtggcccagcagggctgcaagctcagagaaggg tctgaggggaccgtgggatctgtctgctgacttctctctgaaggggagcaggcgctgctg gccccacccctgatcccctcccctccatgtattccgggtctgaaagtgagctcacccgag ctaatgctggagctaaccttagtgccacaggtgactgccacagtatctgcctgagttctc cacagcagcatgcacaggcgcacaggccaccacgggcagtagcttagctccacacagggc cttttcaaagatggaggcttctctgctcatcttcaggaaaaacaaaaggaggaagaaaag agaggagtagtgggcgtgactgcttccattcctcaactgtgccttctgagtagcagcagc ccctccatcccactgtctgtccactgtcagcctctgtgcggacagccacaccctcgcagg ccaatagctggttgtcttattagctacagcagaaagctggtcccgaatgcgacccagccc gtctaacaaggtatccagagtctctttgctcagctccatggtcacagccgagatggaggg tttctctccacacagactaggatcctcctagatcttcatctggagcaggcatatggggac agccattcggctgatgctgtcagaggaggttttgctatccacgctccagtccaggtccac cgggcgtggccgagagatctggtttccttgggcttcggtttgccatgttgatatgtgctc caggatgatttttgtcagcaggttttgaggtttgggtggaaactttctggaaagagagcc agaatcgcctcagcagaggacaggccacaaaggccaccagcctagtggtgcagagtctgg agcagttgctctgcctcctcctgggtcacagacaagctggaacatgtattattgaggagt tttttgttttgttttgttttttttcagtcaagggctgaactggagaagttttctgggcat agtggtctgatgacatcttttgaggaggccttcggcagactctggagcaccacaaaatgc tccgcagtcagggccgccatctttctggagtggagatttttttatttttaattctttatt tttattcttttggtggggtGGGGGTTACAAGGGTGAAGGPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.