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Human element [ hs212 ]


Position: chr3:147,030,229-147,031,770 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PLSCR5 - ZIC4

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tcaaGATTTCACTGGAGGAAAACGtatatatacaaaaaggtaaaataatgatagaaaaaa
tgcatacctcttctactaggagaaagtcacattttaatgtcttgggccataaacatcact
atgtatgtaacttttagctacaatcagttgaggtacagacaataaattcttcaacatttg
gcaattgattgaagagaaatactcacaacatgagctacataaactcattctgtaaatgag
aatattttaaaagatattgactacagatgtttcaaagtagaatttaaggtctcactgggt
gtccccaactggtgatcactctgttgtaagcttaactctttagcaaggtcgttcaaattt
ctgttttcccttctcaacttttcaccctgcaagcagtcattgttacatttcaacacttct
ttacatcaagcacctaatataaactgggaacagctgcaatttcactgcccagccctttct
tccacccttacaacatttgttctgttaatgtaggttaattctgcaaataacacttctgta
aattgttcttgcaaactgctacatcatttatgtaaggacttctgtgaactttgaaaaatt
aatgcctttaattttggttgatggcaacatcagcagagctctgtaaattgcactttaatg
agattttgctacaggggataatctgctactgacagaggaacatcttgaaaacatctgtag
acctataatttctctatgacgattagatcccaccacaagactccaaatacaaaccccaaa
taaagaaggaaaatgtaaagttctaaatgagaatacaacctgttctttaaaagcaagagg
cccactatgaaaagtttcatgcactgaaaataaatcatttttggactaattaacatttag
ctttatttaattaagaaagactattagtatctccactgctgtgcatctgtatataatgaa
gcaaacagcagtaggtataagataccactgagggatatgcccaagtaacccagcactata
ggtgcaaaggaatgtctattactgttaagtaactgacatctgagtcttactttaatgttg
tcataaataaaaggaagatttccacagatgccttcacatatggtttcttatttgtctctg
atggagactggaagttggattagatgccaaaattaaatgatttaaatagacagctgcata
atggaaactactaaataacaccttataaacagtttctaattatagcaagtctaaatcaca
gaaggatgacacattttattttgctagagcaaacattacttgttgttctaatgccattac
gtctaatgcccatagttatgttaccttaacattcactcttgctcatgtttgtgaacacat
accctctttagaatggtagcttttgaaatcacaactcattttccctagtcaaacagtaca
cttgcaaaacaatctgtttaaatatatatcatatttgcataggttgaaataaacaaagtg
acttatatgttacactataTTCTCCACTTTCTATGCTGTGAA
Primer
(+)CACCGATTTCACTGGAGGAAAACG
(+)TTCACAGCATAGAAAGTGGAGAA


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