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Mouse element [ mm2118 ]


Position: chr9:63,560,364-63,565,012 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Smad3(intragenic)

Timepoints:
e11.5

Expression Pattern
branchial arch (4 out of 9 embryos) 

Embryo 2

Embryo 3

Fasta sequence
GTGGAGGTACAGTGCCTGTCatcttaacacttgggaggtaaagacaggaggattaggagt
tcaaggccatcctcagctatatagtaagttctaggctagcttgggctctatccgagacta
ggttttttgtttgtttgttttgttaaaaaatgtttttaaaaaggagaatagccaaggaga
ccatggatcccagtcaaaggagtcaaagtcagattctttgctgaggtcacactttttcta
catgtcactagccctatgacatagccacactctatccatttcctcaattgaaagggatga
aatacttatgtgccccacccccaccccctggctagagatccatccccatatctactaagg
ataaaaaggagatgctaccaaacaaaacagcaaagccctgtttcccggggactgggccac
ccacaatgacggatgtactgagttaaaggctgcttgttccctgcccccagaggcctgtct
gggtggcctctcagccaagtgccatccccgtgccaagcacaaccagaggtggcagtggcc
ccaaatccgtgagaagttggccagcttgggccaggacctccctcacacacactggctttt
tccatcaggcagggaaagtgggagcagggcagagaggcacaagaaagacccttcagttcc
gagaaggatgggcagagcgagccaccagcatcctgggacaaaggtgcatacacccagctg
actgtgtgcctacgctgtgaagtaactgaaatgcaaggcaaggcaaggttgccacttcta
cctccaactggtcccaactggtcttaattagcttcagcttggtgacagaaacagataggg
aagcagccaactgtctgaactgtagaatttactgtagtgaagatactttactgtgtgcgt
gtatttgtgtgggtgtgggtgtgtgcatgtttataggtcagaggacagctttccatcttc
tttgagacagggtctcttgcagttggccactgctcacaccagcgtaactgccccacaagc
tttcagggaattcagtgcctgcttcccatctctctgtagggatgctaggatcatgtatgt
gtgcttccgggtcttggccagatgttgttctggggacctgactcaagtcctcaaatacaa
caactgctttacctcagactgcacccccccccccccaagctcaggggaggaatacggagc
atgtgagggaaagaacatcttacacagagctgtcaatctagaggggaggggcaaagaaaa
acagaacacttgtggtttttaaaaaagatctgattctagggtctacaggagaatcttgat
gtgagcaacactgggtactaacctctcacacttcaccttactctcctctctttcccttga
ctatacaatgtatgcatacatataattgatttgtacatttgtacatacatacatacatac
tatattttttagcatttctgcaaatctttctctttttttggaatgggtaaattaagaaaa
tctacacgtaggggctgggagacacctcagtggttacacatgcttgttgctcaggtatga
agacctgaatttaaatgcccagaaccccccaaaaacaaaattagatacagtcatgggccc
acttggaacccaggcactaagaaacagagacagctgggttccaggagttcactgagcaag
acagtaagcttccagttgattgaatgggggttgggggaaagaccctgtcttgtggaaata
aggcagagaggaaaagagacactcagtttcttgctctctctctcacatacatacacacac
acacacacaatatgtatgtatatatgtgtgtgtgtgtatgtatatatgtatgtatatata
tatgtgtgtgtgtatatgtgtgtgtgtgtgtgtgtgtatatgaataaatataccacacag
gtaaaaaaaaaatctgcacacatacacaaatacaccaaagaaacaaaagtatatagacaa
ataaccacataggcaaaaaaaaaaaaaaaccaaaaacatattgtgtgtgtgtgtgtgttt
atatacgcatatattttacagttggccaatactacaaagctatagttaccaagactggca
gagagcagatgtggatggttgaggcatctgaacacggaaatcagcccctgtgtatgttgt
cagcagtctttcaaccaaagggccaaggtaaaattgagtgggcgaaaaacagtcctcttt
aagcgcctggcaattaaatagacattgtcagagaggaaggaaggaagctgagttctggcg
tgacgtattacacagaaataaaggctaagaggtagagctgaattagaaatttcttgggga
agaagtggggatagacctttgctcctgtgagtttcagaaaagtgaaaacagatttattat
tattattattagttcagcaaaatctctgggtgtcaaagtctaccagggaagtaaaagaga
aaatccacagaatggagggaaaagttcacagcctctggttcagaatgcacggggactttc
atggctcaaagacagaagacagacagacagaccagttcatttaaagtgggtggcaggtga
ggagctacccaggaccttcagccaccagggaaatgcagataagaacagtgacaaggttta
acctcacatccactaggatggctaaaacaacagcaagtgtcagcaagtgtggagagactg
aaaccctcacacatccctgataacccactgctaggtatctactaaggataaatgaaaaaa
catgcaagaaataaggcagacacatagctgttacagtcttattcataagagccaaaagag
aaaaaaccactcatctgaaaaactgacaagcaaaaggtgataagcctctgccgtggagta
ctatatggtcacataaaagaatcgaggcgctgccgatgcatactacagcaagctacgcca
aagatgcaggtcagaagagcgtgtgttggtgaagtccacaagccatcctgaaaaagacaa
atccacgggacagaaagaaggtgacgatgccaaagccaaggagaggggtaggagtgactt
ctgggggagttctgggggaggagttgttttaatggtgaaggaaattaatcggtcagtgct
gatggttgtccaaactcattagcacatggagcgtccgtcatactctgaggctgtttcatg
acagacaggttacacgtcagcaaggctgtcagtgtttacagtcttgtgtcctgatgtgcg
tgcatgtgtgtacacgttcgtttcaatgcaggcgcatgtgtgtgcaggtcatctgagatg
gtcttttggtgtttgttgcagcctgtgcctgtgactttgcagggacagctctaattttac
cggggttacggataaacactgcatctgtctgcaggtagactcaagttatctgaactcagg
gccacacctataatcccaacaccaaggaagccttgacaaaaggccaaggtgaacttgagg
cctgcctgggctatctagcaagatctggtctcagaaaagcaaaagcacttggtaccagca
cccctgaaggaacatactggttccagacagggtagcctgtaacggagcagttctgggggg
agcagctcttgcctgcatgaacaccaccaagggatgagcgagagcttgttttccagagtt
gagccgggtccccctctgactgccctggagagctgtggtttcaagtgtggaggaggagct
ggctatgttgagccatcctgatggcagccctgcttcctgtggggccacagcctgctgaca
tcactggccggctgagagtactcaaggggcatttgatgtcgcaactgcaggcagcacgcg
gggtcatgtgaagttcagagctgggttttctcagcccattgacttttactcatcccgtcc
atgaagcatgtttttttttcctttcttacccccattctcctttccgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtctcctggcttcctttctgagcccccatatcagtgttc
ctcattggcacaaaggcattcttcctacttcagaggactctagctctgtgcacctccccc
ccagaagtcagagtctcaaggctgccagaagttagtggggctgcccctgcccctcccact
ttacagatgaggatcaggggtcccaggcacttgccctaggtcacccagcttccgtcagag
caaaatggctccatttttcaaacctgctaccgcaaaacatttttccctccaggcaagcat
cccacaggaaaatcgttcccacgtgcaaagaattcacaatggaaatcatgtctttcaaac
agcctagcagtcaggattcccaaatgacgttcacccgcctttccgtcaacaaacaattac
caagctattactcttgagcaagtgctttgaaggtgaacaaaaaaatcaatccatgggaac
tgataagccagtttgcaaaggactacggtgggctggggagatggctctgcaggtaaatta
tctcccacagtcatgaggccctgagttcaattcccagcattcacataacagtccaggtgt
ggcaactcgagtcgcccagctctgaggagacagacaccagagactactggcgtgtgcaca
cgcacgcacGCACGTACACACACACACAC
Primer
(+)gtggaggtacagtgcctgtc
(+)gtgtgtgtgtgtgtacgtgc


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