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Mouse element [ mm211 ]


Position: chr9:62,956,042-62,958,045 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Pias1 - Skor1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tgCtGCTCTGGGGCTGTGTCTTATttttctccctgacgaaagcaatttgagagggaaagg
gtgcatttttgccacagttcaaggtggagaagtcaactcatctgctgcccagctctggct
ctccatgtacttggtccaagatcctagcgccaggaatgattctgtccacagtgggtgagt
cttcccacctccattaaaaaaaagtcaagatagctgggcgtggtggcacacgcctttaat
cccagcactcgggaggcagaggcaggaggatttctgagttcgaggccagcctggtctaca
aagtgagttcaaggacagccagggctacacagagaaaccctgtctcaaaaaccaaaaaaa
aaaaaaaaaaagtcaagataagtccccacaggcatggccagaggcccatcttggggtaac
tccagagcttaccaagttgacaattaacattaaccagcacaggctgaagggggagcagga
ttctgcagtgacggctgcctttgccaaaagctgatgacttttcagtacagatcggccctt
caaccgagtagtgaatagaaatgcagagattctgtggatccagggttagaaaagcaaaaa
gccaaaccagaggagctggggatgctgggaaagaggcccgaaagggtatcctacaagttt
ctgttaacctaaaactgctctgaaaagtgggttaaatatcaactgtacaatggtgggacc
ccattgttaatccatgtggccatgcgtgcaaatactgggcaaagtatggggatggggggc
gtacaaccaaaacgaaaggctatggtctactgtgggatcacaggagctcactctgcaggc
tctccttgtccttattttccagaacaggaagagctaggggcggcagggagagcaggagcg
agctgtgcgcttgcttggcgggacgcctgtcctggccaagcatcactaacccgacagagg
attccttgcgtgcaactgcgggtgcacaccccggccggtgcgggcggtccccgaaggccg
gtctagggcccacgatgttctcgcgcccctttgcgggaagcagccgctgggtcatccccg
cagtgctttcggtttgctggaatgttcccccaactgcagaagtgcactttgttcccgagt
gggggaggggcagcaggactcagctccagggcgccctaggacttggagggcggccagctt
tccgttcccagggtgccttctggcgggggcgggggttgtctgcatcccagctgggcagct
ggaggatactggacccgcctggacttcagggccagccctgccacccactagcttcatgtt
ctgcatcaggggtttgatttcctcatttgcaaaatagggacctgaataatgttgacagca
cgcactaccggcctctgccgtgttcctctgcgtgtaccttcctcccaatatccctttgaa
gtgatactgttaacgtaataaggtaattatactattagttggataattctccctggctgc
ccacaccctttgaacatcacagatgctctggtcactgaaaggctggcccagcctcctccc
agtaataaaatgtgtactattattttcactttaaagatgaaggcagagaagctaagaaca
ggtaagtcacttgtggaatggcacagttcccaagtggccgggccatccagacataaacgc
aagcagtcagctggaggctttccagctcttaaaatgcaaatactgccttcctactgctgg
ttcctggaggcccttcaaattcagataaatatacttattcagtcatttcaggctgggtgt
ggtggtgcatgcctgtaatctcagcattcaggatgctgaggcagggggaatgcatgttgg
agtctagcctgggctatacagttaagtctaaaaccagcctgaattataaagtgagaattt
gtctcaaaaatatgaaaagtttgtatgtggacgcttagcaggtataaaccttaggacctg
agttcCATCCCAGGAACCCATGAT
Primer
(+)CACCGCTCTGGGGCTGTGTCTTAT
(+)ATCATGGGTTCCTGGGATG


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.