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Human element [ hs211 ]


Position: chr3:137,125,171-137,126,977 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: IL20RB - SOX14

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
tttgCTGCTTTCAGCCTTGTTCCTgaaatttatgctattgtcagaaatcctagattaaaa
atctagtagtgtggctaaatgtgcttaaccctctttctctctaggtgttcaacaccctta
tcaagggttcatctcttcatttggctgtgtttatgtagatgtgcacaagcaacacacaca
gacatatatagaaacacccacaccgacacacacacatacacacacacacccacactgcag
gaatggactttggagccactttgcatcatcacccctattaggattatcagagtattggat
tgtgggtaaaggaagatctatttctttccaaagggtgagaaaaatgggagggtgtcaggg
agagggaaaagagaagaaaataaagtgtgtgtgttttgggttgggggagggagaaaagga
gagggggaatatgagtgagtgtggagggaggaggggaaatgaaaggatattatatatttt
tttgtatctgtcatttccctgctatctcccatatgacttcttaatccatcagaatgctgg
gaagataatgttttgggcgaaataacatgagagagaggatagactcccaaggaccaatat
ctttattgctcggaggataaacggattatgtcagccattttctgttgctgacagcttttc
ttattaaccgattttattttttaatcttccagggaagaaatatggttttatgtcacaata
aaacgccggtcacatctaattctgccctcaaacaaacagatttctgaaagccttgcagag
aaatttgaaataactttaaagagggggtttttggataaagtctttatccaggggcttgtt
caactgcagtgtaaaaggtttagagagagaggagaggagagagagagagagagagaaata
gagggagggagagagaagagaagagggagagaagaaaagcggagaaaggaagacccacac
agctgttttgcttggtgatctctcttcaaacacactggggtttagtcaggaaaatgcagt
ttggatgaaagagggctgggtagatgaaaagaggaacagtgggcttcttctggggctttg
ggtgtggggaactgcttacccacacctctctaaaactgacacttcttcccagttgttgtt
ctggaaccattaggagttgatggtgtgtctttcaagaatcataaacaaatcaatgtgaat
tctgtgaggcatttggagctcagaggcaattcttgtctttttttccatgattcctttgct
aggaaatttcagcctgcttgaggatttaggtcttcagttagccccaagaaaaccttctgt
caaacaccgcagacaactctggcctttgctcacttctgtaggcctgcaacgagcacatag
ccatcactaatataaaaaaccactcgtttcttctcttctgtgtggcacaaagcaatttag
ccagacagggctcctgcccaccaggggcttagcccagaaaacgtcctgaatttgtgcctc
atactttgttcagtgcccggctcactgcagacccagtaccttgactgataatgatggccg
agtcttacattgtgccctgctgggaagtattggtgatttagagtactttaaaaatctgtt
aaaaataaatttcttggattttctaaggtgttgttttttataagagaaatgggcttttca
aaaaagcatcctgaaacctgggacaatttgggaacttaaagcttgtcctaaggtgagtga
gacagactaaatacctccagtcaactgtgaaaagaggggagattcaaAGGAATAGGTTGG
GCCAAAC
Primer
(+)CACCCTGCTTTCAGCCTTGTTCCT
(+)GTTTGGCCCAACCTATTCCT


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