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Mouse element [ mm21 ]


Position: chr8:87,252,801-87,256,604 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Nfix(intragenic)

Timepoints:
e11.5

Midbrain pattern extends into forebrain-/midbrain-boundary.

Expression Pattern
heart (6 out of 11 embryos) 
midbrain (mesencephalon) (6 out of 11 embryos) 

Embryo 1


Embryo 2


Embryo 4



Embryo 5



Embryo 6

Embryo 7

Fasta sequence
ttgCTGGGTTCTTTGTGGAGTGGcccaggcaccctagctgggccactgggccattcaccc
atagttccatgtacagcctgctggtttctaggtggggttggtaggtcctactctaaaagt
caaggccctctacatctggggctgggaatactggacaggctcctggctatctcatggtat
gataagtaggaggctgttccatttgagggccctgatattcttttctttcatcttgttcaa
tttttttttctttcttgtcagtactggggatcgaacttagggccacacctgtgcaaaacc
agagctctaccactgactgagctatggacccagtcctttaatttttttttcaattccaaa
aaataatagtaaatcttgctatgaaatcagaggtagagattataaggaacgtgtccacaa
gcttccccctccaatctgaggtgcattcttccatgacactgtgagtcagtcacctctgtg
ccatggagggggggtgtcttagggcctcctcctataatctctagctatatcttgagacct
tgctgtaccttggtatcacatagtatggatttccttcttactctctggacccctgggtct
gatgcaagtccaagccagtccaagctagtccaaatggaagccaaggggtctaggtggcat
gtggcctatgctagggccttcctgaaaccccactgtgaagctacctcagtatgctgaaga
agggcagagcctcaagactggcatgcagagtccatcagaggatacatggcacacgccctg
ctgcccatagtctgccatgaatcccacccatcctaggactgacacagcccaaaagacctc
caagtctgggtcagtttgagggtgcacagagttcaccccataggagtacaactggcccac
tgcaaaatgccaaatagaaagggagagctgggtgcatgtgtgtgtgtgtgtgtgtgtgtg
tgcttgtgtgtgtgtgtgtatgcacgcacgtgtgtgcaagcatgcttgcacatccagcca
aaggacagaaaagagtagagaacgtgacaaagagatggaggtgcgccagcgccggcgccg
gcagagacaaatagggctccaggagagtgcgacagacaggaaatccttttaaaccaggac
acttcccaaaagggtgctgctgttattactattagttcatagaaaggagcaaacaggaga
agctggggaggatgaggctggctgccacgcgccactaggcgtggctctgggcgctgctgg
cagccattttagaccttggcagccatcttatggctggcggccttggccagcattgccaca
atgccgccaccaccagcccccaacaagctcagctcaactccaggacaaaaggcagaaaca
ctggaagcctggatctagactcgccggcagaggagccagccctagagccagggcagctgc
agccggggtcctgcaggtctgtactagcctcagcttttatgatccctgcctgggccatga
tagggcagggagaatgaagccggtgccctggcatcactgtagctttgctgaaaggcagcc
ggagctctgagtaccaggtctaggcccaaggacctaccagttgagcaagaatggacccct
gcccaatagggacaagagtatcttggaagtaaaggatgtcagctcaggatacatcttggg
tagacatggcagggaatcggagaggccactggatcctcagtggtcaggctcaggggccag
ccaagggacatccagagatgagagctggcggccagctttcccatgtggcagggctctctg
ggatgccttaaaacaaggtctgtgcctgttctggacatccctagggaccagcagctgggc
cccagggcagcatgccacagagtgtccaggcaccttgcctccctcttttgcctgggaccc
cagcagagagagggaaggccctttacaataacccctcccctggccccgcctcgtggctgc
ttggcttttatctggcagaatggggcttatcagagccaccagctgaacaaacacacaaat
ccacggttagtgagaaaaaatactctgcctgaactctttatctcctgttcacaggccttg
cccactgcccactgccaaaagcacaggagggaacccgaggcggtgcagtgggggctgagt
tctcgctctggaggtggagggtggccttccctagcctggccttgccttgtctaacttgcc
acctcagccacccccttcctccctccttgtccccagcccatccacagtcttctctgggag
tccctgccagtgggtgagtcccggcccacacagaacccccctccagtgtctgctttctca
ctggggacaatgggccagctggtggcctgtggaacagtgaagggacagggatgatactgg
ctcagacaaggcaggcaggtgctgcttcatttcttaccctgcccagcctaccctggtccc
ctagtctgtcatggccctgtctcctgcgggcttttcttgcttcaacctctccagtctggc
taccatggaagcaagggttacagtctcctctgttcagatcagcctggcccaggctgggaa
aagaaaacatctcctctctgcgctctccttctacagagcccggggctcctgccacttcct
ccagagacagaaccaggacaaagggctcaccaccacctcccctggactcaacccaagaca
actcaatggtctcctgagtcctggagtcgaagaaccacacttccctaggctccaaagtgt
ctcccactctgcccggcaaatgaaactacctacctgagaaccaagccctacccatgttcg
atagaggccctcgatgggcaggtagcttggccctgcccacctgagccaggtttggagaga
gctcacagttcattctaagtactgttgggtggttggctataggtcaggcaccttgcaaca
agcaagctcttgtctttctctgaggacccaggctgctcatacaaggcatgagcagaggcc
atccctgctagtggtcttggctactccacagggtgtctggaaggcaggactgcgaaggag
caggtgaaatgatgaattgggattgactgggcacgggcccaagtgggttctacaaaagga
ccttggctgtaggtttcccgcctgctctccagtcatgcctatcccagaggtcatttccct
gctgctacaacttatagaccaaccgcagatgtcagacagcatgccactgacagtggccag
catgggcccctcctttccccatgcctctcaatggctcctgggacagaccaaacaaacaaa
caaacaaacaaacaaacaaacaaacaaacaaagctccccataaagctgcccttcccaccg
cgctttaggtccctgctcttagcccctgagcttctgctgtttttggctttctctcagctc
tctatctatgggttttctttcctaacctctgtcacgctctctgctccttacagttctctt
tctccctcacttctgtctgtgtgtgtgtgcgtgtgagcgagtgtgtgtgtgtgtgtgtgt
gtgtgtagaagactgtgtcataagcatagctctggagggcaaactctcatagccagaacc
cagcattgcccaaaaccctaatgtatgtattcacctgtatgtgtatgtaagtacgtatat
atgtatgtgtatatatgtgtgtgtgtgtgtgtgtatccaaccacagaaaatgatatattt
atggctcctagcaagtgagggaggaattcctgttcactacagccagcactccacggctcc
cacgCGAAACAAGCTCACTCTGCA
Primer
(+)CACCTGGGTTCTTTGTGGAGTGG
(+)TGCAGAGTGAGCTTGTTTCG


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