Mouse element [ mm21 ]
Position: chr8:87,252,801-87,256,604 (UCSC browser)
Source: Lawrence Berkeley National Laboratory
Flanking genes:
Nfix(intragenic)
Timepoints: e11.5
Midbrain pattern extends into forebrain-/midbrain-boundary.
Expression Pattern heart (6 out of 11 embryos) | midbrain (mesencephalon) (6 out of 11 embryos) |
Embryo 1
|
| Embryo 2
|
| Embryo 6
| Embryo 7
|
Fasta sequence
ttgCTGGGTTCTTTGTGGAGTGGcccaggcaccctagctgggccactgggccattcaccc
atagttccatgtacagcctgctggtttctaggtggggttggtaggtcctactctaaaagt
caaggccctctacatctggggctgggaatactggacaggctcctggctatctcatggtat
gataagtaggaggctgttccatttgagggccctgatattcttttctttcatcttgttcaa
tttttttttctttcttgtcagtactggggatcgaacttagggccacacctgtgcaaaacc
agagctctaccactgactgagctatggacccagtcctttaatttttttttcaattccaaa
aaataatagtaaatcttgctatgaaatcagaggtagagattataaggaacgtgtccacaa
gcttccccctccaatctgaggtgcattcttccatgacactgtgagtcagtcacctctgtg
ccatggagggggggtgtcttagggcctcctcctataatctctagctatatcttgagacct
tgctgtaccttggtatcacatagtatggatttccttcttactctctggacccctgggtct
gatgcaagtccaagccagtccaagctagtccaaatggaagccaaggggtctaggtggcat
gtggcctatgctagggccttcctgaaaccccactgtgaagctacctcagtatgctgaaga
agggcagagcctcaagactggcatgcagagtccatcagaggatacatggcacacgccctg
ctgcccatagtctgccatgaatcccacccatcctaggactgacacagcccaaaagacctc
caagtctgggtcagtttgagggtgcacagagttcaccccataggagtacaactggcccac
tgcaaaatgccaaatagaaagggagagctgggtgcatgtgtgtgtgtgtgtgtgtgtgtg
tgcttgtgtgtgtgtgtgtatgcacgcacgtgtgtgcaagcatgcttgcacatccagcca
aaggacagaaaagagtagagaacgtgacaaagagatggaggtgcgccagcgccggcgccg
gcagagacaaatagggctccaggagagtgcgacagacaggaaatccttttaaaccaggac
acttcccaaaagggtgctgctgttattactattagttcatagaaaggagcaaacaggaga
agctggggaggatgaggctggctgccacgcgccactaggcgtggctctgggcgctgctgg
cagccattttagaccttggcagccatcttatggctggcggccttggccagcattgccaca
atgccgccaccaccagcccccaacaagctcagctcaactccaggacaaaaggcagaaaca
ctggaagcctggatctagactcgccggcagaggagccagccctagagccagggcagctgc
agccggggtcctgcaggtctgtactagcctcagcttttatgatccctgcctgggccatga
tagggcagggagaatgaagccggtgccctggcatcactgtagctttgctgaaaggcagcc
ggagctctgagtaccaggtctaggcccaaggacctaccagttgagcaagaatggacccct
gcccaatagggacaagagtatcttggaagtaaaggatgtcagctcaggatacatcttggg
tagacatggcagggaatcggagaggccactggatcctcagtggtcaggctcaggggccag
ccaagggacatccagagatgagagctggcggccagctttcccatgtggcagggctctctg
ggatgccttaaaacaaggtctgtgcctgttctggacatccctagggaccagcagctgggc
cccagggcagcatgccacagagtgtccaggcaccttgcctccctcttttgcctgggaccc
cagcagagagagggaaggccctttacaataacccctcccctggccccgcctcgtggctgc
ttggcttttatctggcagaatggggcttatcagagccaccagctgaacaaacacacaaat
ccacggttagtgagaaaaaatactctgcctgaactctttatctcctgttcacaggccttg
cccactgcccactgccaaaagcacaggagggaacccgaggcggtgcagtgggggctgagt
tctcgctctggaggtggagggtggccttccctagcctggccttgccttgtctaacttgcc
acctcagccacccccttcctccctccttgtccccagcccatccacagtcttctctgggag
tccctgccagtgggtgagtcccggcccacacagaacccccctccagtgtctgctttctca
ctggggacaatgggccagctggtggcctgtggaacagtgaagggacagggatgatactgg
ctcagacaaggcaggcaggtgctgcttcatttcttaccctgcccagcctaccctggtccc
ctagtctgtcatggccctgtctcctgcgggcttttcttgcttcaacctctccagtctggc
taccatggaagcaagggttacagtctcctctgttcagatcagcctggcccaggctgggaa
aagaaaacatctcctctctgcgctctccttctacagagcccggggctcctgccacttcct
ccagagacagaaccaggacaaagggctcaccaccacctcccctggactcaacccaagaca
actcaatggtctcctgagtcctggagtcgaagaaccacacttccctaggctccaaagtgt
ctcccactctgcccggcaaatgaaactacctacctgagaaccaagccctacccatgttcg
atagaggccctcgatgggcaggtagcttggccctgcccacctgagccaggtttggagaga
gctcacagttcattctaagtactgttgggtggttggctataggtcaggcaccttgcaaca
agcaagctcttgtctttctctgaggacccaggctgctcatacaaggcatgagcagaggcc
atccctgctagtggtcttggctactccacagggtgtctggaaggcaggactgcgaaggag
caggtgaaatgatgaattgggattgactgggcacgggcccaagtgggttctacaaaagga
ccttggctgtaggtttcccgcctgctctccagtcatgcctatcccagaggtcatttccct
gctgctacaacttatagaccaaccgcagatgtcagacagcatgccactgacagtggccag
catgggcccctcctttccccatgcctctcaatggctcctgggacagaccaaacaaacaaa
caaacaaacaaacaaacaaacaaacaaacaaagctccccataaagctgcccttcccaccg
cgctttaggtccctgctcttagcccctgagcttctgctgtttttggctttctctcagctc
tctatctatgggttttctttcctaacctctgtcacgctctctgctccttacagttctctt
tctccctcacttctgtctgtgtgtgtgtgcgtgtgagcgagtgtgtgtgtgtgtgtgtgt
gtgtgtagaagactgtgtcataagcatagctctggagggcaaactctcatagccagaacc
cagcattgcccaaaaccctaatgtatgtattcacctgtatgtgtatgtaagtacgtatat
atgtatgtgtatatatgtgtgtgtgtgtgtgtgtatccaaccacagaaaatgatatattt
atggctcctagcaagtgagggaggaattcctgttcactacagccagcactccacggctcc
cacgCGAAACAAGCTCACTCTGCA
Primer
(+)CACCTGGGTTCTTTGTGGAGTGG |
(+)TGCAGAGTGAGCTTGTTTCG |
|