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Mouse element [ mm2093 ]


Position: chr9:63,600,649-63,605,361 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Smad3(intragenic)

Timepoints:
e11.5

Expression Pattern
forebrain (6 out of 6 embryos) 
hindbrain (rhombencephalon) (6 out of 6 embryos) 
neural tube (6 out of 6 embryos) 

Embryo 2

Embryo 3

Embryo 4

Embryo 5

Fasta sequence
TGGCAAAAGCCCAGCAGATAaaggtgtcatgcaagacagctctcctcaggttccaacaca
catataagcacgcactcaaacaacacagacacagacacacacacacacacaaacacacac
acacacacacacacacacacacacacgagggatgtttcaaggaaaatggagatcaccatg
ttaagcaaaaatcaaactgagacagatgtagtgtgacttttcacatagactgaatctaca
gttttttttaaaaaaaaattgtaagacacaaaactagaagagggactacacagaggccag
ggcaggattcaagatgggggttgggggcccaagggaggtacatatactcaaaatacaaga
ctcaaaaaatggcatgataaaatctagtttgcacaatgaacacacataaataataataaa
ggaaagaccaagttcccaggagcttcacacagtccaaactcctcagaccatcaccccaac
aggtatccagcacacaccaacctccccaacacacatgccagctcccaccgggagcactgt
tcgaccctcggccaccctgccagctctctatcctggggcagggatgctgagttccttgag
agcagtgactggttaagtcccaccatcaaagcaatgaggacgcaaggcaaaacacaaaaa
ccctacatctccgcagcatgtctgtaaactcttctggggcctcattttaacccagtttta
tgcccatccaggaaggctctgggctggtgaaatgactcagccagtaaaggtgcctgccac
caagcctgatgccaccaagcctgatgacctgaatgtcaccttcagaactcagacggtgga
aggacagaaccatcgcctgcaagctgtcctctgatttccaaatgtgcaccacatcatgca
cacaatacacatacgtgcacacattacatacacacatacatgcattaatacaatacaacc
gattttaaatccaggcagggacctgaattctaggggttgggtggggtttatctttcccca
gagaaagcaggtggctgtcatggtttaatattctaatgttgtgccttcacatgttaaaac
atatatcacagtcatcttccccacagtatccccaatctccaaaaatgtccctgtcttctc
aaacacatctctgcatccctccctagggcatataacattgggtcagaggccggatacaca
agaaacaatcctgttttctgattagaaacagagcaaaaatgctgcccgcaaaaagtatgg
attcaaacattctgccctaggaccaagcaggaagggtcaaagttcctccagccagagaat
actgaccctgtggtccagcgccctagtcagctacccgctgttctgaggccctgttctgat
ggctcgcatgctggcagctgggaggaggcttgctaccaatggtttacaccgaggaggttg
gccagagacctacctggcattgtcaaaagccttggtgtttctgtccccagaagctggaga
aagctgttacaatgaagatactcttcctctccctaccagttgagggtagcctagcaaagt
ccctggtggccccaggaggaggtcatactacaaagggagtggacaaaggtggtggtgggg
tgcttcctgtaagacctacttcacttcttgatttttttttccccctctctggatttggtg
ctatgcaacaatgcccaagatcccttctaaaccagagatgccttcagcttggtccaatac
tggctctcccccgcggcaggcctgtctctctcaaaggcaggtgcttcaacttccctttag
gaactagagagggagacacctgtgtctcctctcagccgctcaagcaggtgggagtgggct
gctggcatggaacttgcctgagctctgccccacccctgccagatcagagatgccctgctc
tccactctgtggcttaaaatgaaactcctacacctcatctctgtgaaggcaagcaagcct
ggggcactccagctctcccggtcactgaatgtgcctagagcccgggggaaagaagaagcc
agcatgtggccaatagctaccacagccaaaaggttccacatctcagacggagagtcctca
cagcccggctccagatctgacagaatgtactgaggcacccagtgtcccgccccactcgaa
gcgggtgactaagtcacacactttcctttgtctgctttccaaagccctagttctcaaagg
cagcaatgtgacaagcaacacacaagcccggggcttagcagacacagggctagcacgagc
acataggggcttagcagacacagggctagcacgagcacatagccaactagtcgcctcccc
aagacgtggcctttagctttctgcccatggccaaaacagcagcagctgttgccaagggag
acagggtgacccagaggcgtgggcacaaaatccagggatggaaatccacctttgtctgga
tccacccaagcaaccgggtctctctagttgagaaaagatgaaagaaaacaatcccaggac
tgggagggtagctcagtagcagagcgttggcccaacatgcaggaagccctgggttcagtc
cgcagtgctgccaaagaaccggcaaacacacaccctgcttccaaagcccgaggtctacgc
acaggctgaaggtacctagtcctactcggctgggagcaaaagtgttagcctgaaatctca
gaagcacactagctttgacctgcctgtgaggaaggcacagcctctcctccaagctgaccc
cagcccaaagattaaccaagagcgttgcagacagaagagatccaccacccaccctggaca
cggatgctttggggactcggagttcaaaacagactgggagaaagggcatgccagatctag
tcgaatgaatgctttccctctctaagttctgttgctttgcaagcaagatcattttagacc
tccgtgccttttctatgttccagttctgtcgtcgaccatatgaaagtgccttgtaaattg
tgaaatactttgcacagctatttcatacttgatagcactggaggagggttcaaaacagaa
agcacttgagctgggtgcactcgggcagatgggggtggggggtggggggaggctgcttct
ccagacctgacagagctctgtgaaactcaaccgcccgcttcagcaaaaggatagaggaga
ttggaaagctggagaagaagccaaaaacccaggtgcctctgactatcacatcacccctaa
cgccagctggcaaaggctcagcagccaagcgttcttccagaccacatactgcctgcctgc
cctctcctttacaggtggaatccacccactcaggtttgggggttgttagatttttgcttt
tgttgtgttttgtttctgttttctttaagtgtcattcccaccatatgtggtgtgtgcttc
tagggaaggccgaccctgggttcctgtggacagatgttgttttgtgtcttactatcaggg
ctggcagcccatacacagctgccttgagcaggtggccaaggatggaagctacccctgcct
agacaggtgatgacctctactatcgtaggccttctttccatccctctgcaggcagaacgc
ccccgcccccccccaaacatccccacctgcccctcatctggaatcagtctttaaaggtgt
ttgagaagaaacaaaaccagaagactaaagtgctctcaccgcattgcccagacgcgggta
tgctctagaaggccttgggagtgaagtcactgaccccttccatcagccatctgtgagctc
ccgccggactcctctagcccgatgggaaggataaaggaggtcaggacagatggcaaagcg
ctttgggaaaataggctctacaggaatgcagggccgatgggaggccagccctggggtgtt
ttgttatctgcctggagctgcctgctccattctaggcacccgcatactctggattaaaaa
gatcgcaaatcagcaggggtggggtggaaagagggaaagcccctactttctgccacttgt
ttctcccgcttcaaagtcggtgctctgctctccaactaagtgcgtgcgtgcatgcgtgca
cagggggcgggaggctggcacaaccaaatctaaaaatactcagtaaaaatgctaatccca
aagcaaagaaagagcgaagaaggaatctgtcaatcaacgggctcccgctcctcacccaca
gctgtaccgactgcattcctgtagacgaggaaaagaagtgggggaacagagctgaagaaa
agaaagggacacacgccaccacctccacgagcgcggggcgggaggcggcggaggaggagg
ggctcggccggcagagccgaacaaagcggggcctccacttggagcccgaagccccgagag
ttggggggccaagctcagaaacacccctgctgcccggaagcagctggcgacccttgaggt
ctagaagccaaaatgctgcacggaagccaggtctctgaggctaggcaaatccgaaggttt
tgtttggggtccctccacccactccccgtcccctacaggcgcgcgcacacacgcgcacac
gccctccctctccacccgggccgcgctagggggctgggccagtgcgcccccagccgctct
gggaccccacctggggatggtaatgcacttggtgttcacgttctgcgtggtgatggcctt
ctccagctcgtccAACTGCCCCGTCTTCTTGAG
Primer
(+)TGGCAAAAGCCCAGCAGATA
(+)CTCAAGAAGACGGGGCAGTT


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