Mouse element [ mm2089 ]Position: chr13:15,384,707-15,389,855 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: AW209491 - Gli3 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence AAGCTCCACAGAATCAAATAaccctactataaaatgggatacagagctaaacaaagaata ctcaactgaagaatatcaaaatatgaaattctcaggcaaattgatgaaactagaagatat catcctgagtgatgtaacccaatcataaaaaaagacacatggtatgcactcactgttaag ttaatattagcccaaaagcttggaatacccatgatacaattaatagaacacctgaagctc aagatgaaggaaggtgacagtatgggtgcttcattccttcttagaaagaggaataaaata caggaccaaatacagagacaaagtgtggagcagagacttaaggaaaggctatccagagac tgccctacctgatggtccatcccatatacagtcactaaacccagacactattgtggtggt aagaagtacatgctgacaggagcctgatatagctgtctcctgagaggctttgccagagtc tgacaaatacagaagcagatgctcacagccaaccattggactgagcatggggtccccaat ggagaagttaaagggctgaaggagatgaagggtttgcaaccccataggaagaacaacaat atcaaccaaccagatgccccagagtgcccaaggactaaaccatcaaccaaagaggacatg tagagggacccatgactctaggcacagatgtagcagaggatggccttgccaagcatcaat gggagaagagacccttggcccagtgaaaggtggatgccccagtgaaggggaattcaagga tgggggggtgatagagggtgggtaggtgagggaacaccctcatagaagcaggggaggggg aatgggatgggggtgtctgggaggactgggaaagggaataacatttgaaatataaataaa gaaaatattcaatttaaaaaaaaaaagaaagaaagaaaaaagtgggaaagacccttaaac ttatggacacaggggaaattttcctgaacagaataccaatggcttatgctctaagacaaa gaattgacaaatgggacctcaaaattgtaaaacttctgtaaggcaaatgacactttcaat aggacaaaacagcaaccaacagattggggaaagatctttaacaatcctacatccaataga gggctaatacccaatatatacaaagaactcaagaagttggactccagagaaccaaactac cctattaaaaaatgggatacagagctaaacaaaggatttccaattgagaaataacaaatg gccaagaagcacctaaagaaatgttcaacatctttagtcatcagggaaatgcaagtcaaa atggccttgagattccacttcacaccagtcagaataggtaagatcaaaaactcaggtgac agcagatgctggtgaggatgtggagaaagaggaacactcctccattgttggtgggattgc aagcttgtacaatcactctggaaatcagtctgatggttcctcagaaaactgaacatagac ctcaggacccaacaaactcctagacatatacccaaaagattctctaacatgtaacaagga catatgttccactatgctcatagcagccttatttataatagccagaagctggaaagaaca cagatgtccttcaacagagggatagatacagaaaatgtggtaaatttacacaatggtgtg ctactcagctattaaaataataactccaggaaattcttaggcaaatagatgaaactagta aatatcatcctgagtgaggtagcctagtcataaaagaacacacatggtatgtactcactg ataagtggatattaggcaaaaagctctcggcatacccacaataaaactcacagaccgtat aaagctcaagaaggaggaggaccaaagtgtggaggcttcagtccgtcttcatagggggaa aaatattcaagggatatagagggtaggaggaacttgggatgaagagaggagaggcatggg aaaaagggagggcaagatcaggtatgaggagaaatgggggtgatatacagagggtcagga aattgaacacaggtgtgtaacagtgggggatggggagctgggggtagccaccagaaagtc tcaggtgccaggaaagcaagagtctcccaggacccaaccagtatgccactagctaaaata cccaaaaaaggagagaaagaacctgtagagaccatatgcagaggttaggcatggctcctg gatgagggatgaggccacccattcatctccaaaagtttaaccaagaattgctctaatcta gaggaaatacagggacgaagattgaagcagatactgaaggaaaggccatacagagatttc tccacctggggattcattccaaatgcagacacacaatccagacactattgctgatgccaa gtgcttgctgacaggagcctgagatagctgtgtctcctatgaggctttgccatgcctgac taatactgatgtggatgcttgaagtcaaatatctgactgagcatggtgaccccaacggag gagttagggcaagaactaaagaaacgtaagagggttacaaccccatagaaagaacaacga tatcaaccaaccagacaccaagagctcccagggactgaaccaccaaccaaagaggaccca tgactccacctgaatatataacaaatgatagccttatctggcatcagtgggagaggaggc ctttggtcctgtaaaggcttgatgctccagtgtagggtaatgctagcatggtgaggtgga aatatgtaggtgagtggggcacaccctcacacacagggggagagggtgggagagaaggtt taccaaggggtaaccaggaaaggggataacagttaaaatgtaaataaataaaaacccaat gaaaaatcattttaattatgaatattaagacaattctgtggaggattatagaaataatgt tttagcctgaaaagaaagacattcaaaatttacatggaaggaacaatgccagactaaaca atcaaagcagatctgaaaaaaaaacataacagaatgtagagtgaagtaaccagtcaatat ctgatttgagttaaggtccactccatgagatggaacccaactcaatagtgcctgggtacc caaaaacctatcattgaataggccatggacctagtggaaaactaaaaactactgttccac taacagcaataaaattgacaacatcatgctatattcataggcatgtgcctagttcagcca tcatcagagaagcacataggaacaaatacagagatccacagccagataatatgcagagag tgagagaccatggaacacctagctataaaagagatgtctccatcaaatgctgtggggatt ctgcacaagaggatgcagaaagaatgtaagagtcagaggagatggggaacaccaatgatt caaggccttctagagataacaggcctagtgcacatttgaactcattgagactggcacaac ctgcgcaaagccataatgggtctgtacctgatagggttctagagctgaaaggagaagtag acagatgccctatccgtaagccagaagctatcttcaattgatagccacatgcaaatgaaa acttagttttctccaaggaactgtcactggagaaacaaaccatctctttttttggggggg agggggtattttatttttttacatttcatatgttatccttttttccggcttcccctccag aaacccccatcccatcttccctccccctgcttctacgagggtgctcctctacccacctac ccactcccacctccctgccctggcattcccctattgtggggcattgagccttcccaggac caagggtctctcctcccattaacgttcgacaaagccatcctctgctacatatgtacctga agccatgggtccctccatgtgtactctttggttcgagccctggaagctcatgtctggttg gttgatattgttgaaggagaatagttcccatgcccagcaggtggccaacacaaatgtgtt ccatgaaatcttaggaagtcccttgtatcataatattaagtcatggtggggttttctttt gttacctttgtctgctagcttttcttatgtgtatagattatgattccagtttgagatttt tatgggatttctgagtgtgcaaacctgtgtgtttctgcatctgcatgttcttttgggctt ttcttgggctccttttcttgtttggccatatttgattaattttttaaacttatcttatca tattttattattattattccttagattcctatttgttttctaagaacagacaaaaaagga gtttggattcagatgggaggggaggtagaaaggagctggggggaataagaggaggggaac cataaccatatatattgtatgaaaaaatatatattgtatagcaatacatattgtatgaaa aaaattatttttaaataacagaaaaaacaaacacacaatagacccatcatcttctgtgaa attgattcagtaatcaaaaatctcccaactataaaagaccaagaactaatagaattcagc agaaaatgcaagcagacgttcaaagaagaactaatatcaataatcctcaagttacttcaa acaaaaatggaaacaaaaggaacatatcaaattattttttacaaagccactattaccaaa accacaaaaagattcaaccaaaagatgaaaattatatatcaatatcccttatgaacatag atgtaaagagtcacaataaaatacttggtacctgaattcaagaacacatcaaaaatatta tccaccatgatcacattggcttcacccagatatgtaaagatggctcaaagttcataaatc aatagatataattcaaaatataaatataataaaggtcaaaatggcatgatgcaatccaac tatactttcatgataaaaattctggaaaaactttaaacacaaatgatgcatctcaacata atgaagacaatttatgtcaagtccacaaccaacatcattttaaaagaggagattctcaaa gcattttcattaaaattaggaacaagacaaatgtctacttccttcataggttttggattc ctagcttaaagtctcagctagagctataaGACAGCTGAAGGAGGTCAAGPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.