Mouse element [ mm2086 ]Position: chr13:15,279,861-15,284,964 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: AW209491 - Gli3 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence TTATTGGCAGTTGATGTTGGaggagaaaaaaaatcacatttgaaagaagagtgaccactg acaggttcccagtggcccagtggataactgcatatctatgtacatacacacaagtaatat gaattaaactcattgtgtttaaacaaacaaacaaaccaacaaacagattaggagatagag agatagatagagagataaagagatagatagatagaagacatgaatttgtgaagtagatgt gatgaaggggccttgggggaatttacaagagaggagaataagggagatatatatatcaag atacattgtataggtgtatggtattttcaaatacattttctaaaggaaaactagttagtc ttttactcatgggtggcatgatacacactttgtttgtcccagaagcttatgggctttaga cactcggtttgttcaacatattttagaaaagcctaggtttcatattttgtagtttctcgt gttgtgttgccccagagaaacttatttccgtgcatgcctccagggaagatcctgccagct ctaactcttctgttgtcaggcatgtatgtatcacccaaacacatgcaatagtgcaccaga cactgattctgtcacattgagcatacttaacacatgtgagcttcactttcttcttctatg agggtaataatacctaagctgtagagtagttttaataatctacagagtattttgttatta gtctggcaggcatacatgctatgatgatctgcacattctcagaatggttactgaacctag gaaatgtgagctcttatgaaactagcttccttccctgctctgaactcagttcacatcctc ttaaaagctactggttgctttcctagtgtcttagggttcccattgccgtgaagagacaac atgaccacagcaactcttagaaagataaacatttaattggggctggattacagtttcaga ggttcaggccattttcattatggcaggaagtatgtcagagtgcagatggacatggtgatg gaggagtgaagagttctacatcttgatcctaaggaaaccaggaaaagtctgtctcttctg caggcagtcaggaggaggagctcttccacattaggcttgaacacaggaagagaactcaaa gcctacctacagttgacgcacttcccccaagaaggccatacctattccaaagaagccata cctcctaatagtgccactccccacaggccaagaatattcaaaccatcatacctagtatcc ccccatgatgtttactccagaactcagtgagttcagcttaatatggccctactgggctgg agtgatagttcactgattaaaagcactagttgttcttccagaggtcctggcttggttggc agaattgacatggtaactcaaaaccatctataactccagttctaggaaatctaataccct cttcgggcttctgttttcaccagatacacaagtgttgcacagacatacacaggcaaaaaa atatatacacataaaaaataaaaaggataaataaataaataaataaataaataaataaat aaaaatgtccacttcctgagacttccttgcatccagagactatcacttgattccagtcta cctaaagttatataagctgaaatcttggttagggacttcaggatgcttggtgaagggctg agcatggcaccaggacttttcgggtctttgcctttggtcctcaactaggattggcagatt tattttgatataattttaaatttaaatcaacaaggtatcctgtatgtttgtttataattt tggcagcactccccctctgcttttaattccttctccctgtgtaataggtagataccaaac caatacataagaggaagggataatggtggagaatgttgagggatacaaccagctgaggtc atccaacatcaggtctctccaacagcctgtactagttaacctagcacttctcttgcagat aactcaatggaagccttatctggtgcgcttgcaggcatcactttattctcattttctatg accttctactctgttatattcaactgatggttgcaatgatcactttcatgctatcatccc cccaaaaaaacctccatttccttgctttcctctctttgtcaagcacactttataatagtc tttaacatgggcatattatattctctaaagtcatacaaaaaaaggctttaacctctcaag agttaaaaatgtatccctcaaatgtccctgaagtacaatattataaatatatctggccac aaattctaaaatcagtcatacttttcattacatgcatttgcatttgattctgtttagtta acaaatttcatagtttgaactttaaaacataaaacttttcagaaaacaacctgctttttt ttcttcctctcaactaaacatcaaagtaaatggaaggattgggacctgaagagctctcaa tcccttggcctactcatagatcccccacccccaccacaagctgactgccaagccaggaac taatcattacattcagtttccaactcatttccccataattgtgtcctgtattgtgcacca gggaatattgttaaagtgatcatctcagaagactactcactgtctcagaaacctctcttc ctccccagtatattccccttgtctgattccccagttcctggctagcagacacatggtttg aaagtggccaacaattacagccttgtcacttacccagccttgtctagccatactaacttt ctctctctggcctgccagcatacacagttccatttcaagttccatgcccatgccattaaa tcctagagaataccctctcctctctactggttactctgattcttactgcacatctcaggt ctggtttcctgagctgctttcagctacactgattcctctctgcagtacaatcctattcag ccctaccttgacttacacaagttcacattgtcacctgattaaaaaatactgcctcttagt ataatgtggtttgaacagatataatcagagaaaaaaatagaataactgaggtgaaaaagc ttatggaactcttctgttccagagggggaaatatatttttttctctgcttccaaggagct tccatttcactcacacactgatacatcatcacctctttccctggcagccactgacagtaa cacagagcatcctaggctgcacatgaatggctccacatcatcattgtttattggtggctg caatatatcttcttacggtattattttcagttgtcacacagtgctgaatgcttagcctct ccccttagattataccttaggtttccttttcctgttgctgaaaaagtactctgacaaaag catcttaataaagaaaggagtttattctggctcatagttcaaattcaaggatcacaacag cgaggaagtcaagatggcacaagtttgaaaaggctgaccacatggcatccaccatcagga agtaatgagtgataaatgcttgctcctactccattctctttctccacttatacaaatcag tattacagtcaaggaatggtgtcacccataacgtgtgagtcttcccacttcaggtaatgc aataaagataacctgcacagtcatatctaaagacaaatctcccaggtgactcaataacac attaattagataccacatacaccaaacccaatcccactccttggttttttgtaaatcaag attttcctgtatttttcatcaacaatatcaagtatattaatatggttcctcaattttata aatgttgctttatttatcattccttctaaaaacattaaggggcttgtacaatgcaaaata cctagcttatgatgactgaataaggccaagagtcttacaaaaaatgaggggtactgggga acaaatatttgtgattaggacatttgtaaccaaaattccctcctgttcaggaatggttta cagtgacaggtcatattgaagaattcccacaagttatttccacaagtttatctggacaca gtaacaagtcattgcctataaaccatcatagctaatgccccccaaagggacaactggtca gcttgattgccatcagaaggacacaatgtctcaataagttattaattatcccctactggc aaccaacctttataaagaagtgaacactgtatcatatagatagcaatgcatattttaaat ccatgactcaaacaaggcagacatttatatatgtaacttttgtgcaaattcataggaaaa tctgttttagaagtttccagggatgtgttatctttagccaagtaactcatggccccagca ttcactattatagtggttgatctcccaggacatttccaggatatagctttccaaactaaa taccaccttatggttcaaaacagctgttagtccagtcattatttctatgtacagttaaag aagaaagctaaagtgggagaaagaatttccctagtttacttgggtccatgccctttaaga agctttctaggaactaactacctcacattccagtttctgtataagttagagcctctcaga aaatctgagccaacagaatataaataggtatgtaggtagagagtaaaggacagattgatg tgatatgatgtgatatatttgataatgagaaagtacttgctatggaaattgcctcatgta ttatggaaagtctcatatgtgctgacaacaggctggagaatgggaatgtcaaaggcatgg aacagtttaaggtcagagacctcagaatcaagtgatgtaactctcagtatgaggtattgg acatgacaacccaggggacagaagtaaaagccttcagtcataaggccagagaaattggag ctctgggagatgcagggaaacaggatctctgcagtagagagtgcacatcactgttcctct gcctggtggttctctctaggccaagaagattgcgcccacccacactggaaggataggtct tcatcatcaatcaattgaattgcatatgagctgctctggggatcccataatgcagtcaaa ttgagacaaaggtttgcccaatgccaagttcctctcttggttcaGGACACATCCCACTAG CATAPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.