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Human element [ hs2086 ]


Position: chr4:99,576,760-99,579,288 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: TSPAN5(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AACCATGCTGTTGGCAATCTcttcttcataattgtatgggagtagcaccgagtctgctgt
ttttggcaatcacagacaggttggtgactctgtagagagcagaggtgtgtaacttttcag
aagcaagctgccaagctactgaccccagcttttcagtcactaacatcttagtctgaatta
ctttaaccaaaaccatatggttgcctttctgttgatcatcactagagaccatggtacaat
aaagcaggaaatttaaatatggggtaattttgaggcagagagcaggataggaaaggtatg
agggagtatctgagaggaaggctttgggcacagagaggagaggaagggaaggcaagaggc
agggtaagtgaagggccctcataaggaaggcactcacttaacaattctgcctggggcagc
tagtttagtcccatagcctaggtctcctttcaggcttcccatactcacccacccacctat
gaagaccttcacaatcagaaaacatgcggctctgttctggacctctccaagcaagcactc
tgcaattctttgaagctctctacaattccaggggttttgctgcaacctaatccatagaaa
gggctaaatttgtctctatgcactccacagaattacagcaaactgtcagggaaacagacc
caaatccttttatttccttaccaccccctgctaggaaacggcagagaaagtccctgggtg
ctttttgttgctgggtagctaaaatgtgcaacttttagaaatgttcaagtagaaacaaga
ggcctgaactcactaccccaaaaagaaccagtcccagttcggtagtccgtgcctctccaa
gtcacaaagtttcaagttccaatcaaatcagaatatcttactcaaaaccgtggctaccca
ccacttttaaacattttcacaaatggagaaggggcaaagaaagaaaataattccttcttc
ctgtacttgtagcagtgtttaattgcagggaggtgggtgactgctcccgggaatcatgca
caacactggcaaaaaactgcctgtggaatgatcggatatgacatccattcatgtgtcccc
tcattatctttattagtcctgaagacagatgacatgctgacacggaaagtggtctccaat
cccttgcatttcccctcacaaaacatacatgaccaatgcaaggtattataatagaaaaca
gaaaataaaataacctggtaagagtgcggtacaaaaaaagaatatgaagagccgtattga
caactattctcacagatgtatatacgtacagcaaacagcccaaattaaaggagaattcaa
ataaatacattccgtgttcagactgctgtggataattattgatcctgcagttggagcatt
gtttacctcacactgaacagcaacttagagaaccccctacccagacagccaccatcttta
ctttctatggaaatgcgggtgcccactgaggaagaggatgagatgggatgagaaggggaa
gaaaaataacatggtctttgaaccaacgttttccccttgtcctggagaactctttgtctg
gctgctgaacacgtttgccagatcaaggaaaagaatcaaaacaaacaaacaaacaaaaag
agtaggcgtcccagcctaattacaataggttcccaacacattgcagtcccaagcagagca
tcatttgaatcttgtgttaaagcatttgctctctcggttccccaataaaacatgcctcgc
acaccttctcctttgcatttctacaaaggttcccccaaacggcccgctctgtgtcactcc
tttaaaaatgaggacgtggggcaggaacacactgaaatatatgttgacggtgacttatta
tcctgacgatgatatatacatacaaataaatccctctaccccgcacccccactgaccagt
ccattacgcacagggagcgctttccagctgaagaggagagcgtgcaggaaacgttattta
cgtgcaattacaggaccatataccacggcatctgcatcctacacaaagcccgagatggtg
caagaagatacacgctgagcatggcacagaccagccgcggcaacacggagccaagccctc
gtccaatcagatcgttgttagaaggtggacctcagggtcggccgtgcccgattagccttc
cctattatgacaccacgctctgcccaacatctatatcccaccgagagcaaatccaattcg
tgtggttgctcatttctcaaactgccgaaccctttcttttatctgcatccctgctattcg
ttcctcaaaaagccaccagaaggcctcggtgccccctttccgcctcgatttctcttttca
cctcttcccattcctcgaaaggattaaatgtttatctctccaacgcgcaagctggaaagg
cggaaggcgaatgcctctatgctgctccggcaagcgcctgcggggctgcgaaaagtaaag
gcaacgaacaacgtgggggaaatcgtcgcgaatcgatcggccacAATAGTTGGAATCCCA
GGAGCGcTc
Primer
(+)aaccatgctgttggcaatct
(+)caccgctcctgggattccaactatt


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