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Mouse element [ mm2084 ]


Position: chr13:15,270,210-15,275,846 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: AW209491 - Gli3

Timepoints:
e11.5

Expression Pattern
neural tube (4 out of 8 embryos) 
tail (4 out of 8 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 10

Embryo 11

Embryo 12

Fasta sequence
TTGTCTGTGAACTCAGCCTTgtgtcatcttactgacatcctactctggctttgcacaagt
aagttgtgtgctaggagttggcgaaggctaccatatcatatccacttcttatctggtatg
attgggtctatgggtaaaataaaattacccatgtcacataattaatttgctttattcctc
ctttgctcccaatgaaaaggttgtagtgatgcgcacattaaatgataagtatattaggac
aaaaactggaggttggagaaaatatgttgaaccaaaaaaaggattaaagctgggcattgt
ggcacatgcctttaatcccagcacttgggaggcagaggcaggcagatttctgagttcgag
gccagcctggtctacaaagtgagttccaggacagccagggctatacagagaaaccctgtc
tcgaaaaaccaaaaaaaaaaaaaaaaaggattaataaaaagagcgatctggagattcctc
aatagttattaatgctttctactcttataaagaatctgggttcacttcccagcagccata
tagtagttcatagttgcatgtcttttagttacataggtcataaccacttataattacagt
ttcaggagatccaatgccttattactgattcctcaggattctacatgcacaatgcacgca
caaatactcatgcaggcttgcacacacagacacacacacagagagagacacacacacaaa
taaatgaataaatacataagttcttttaaaatagaaacaaataaataataggagcataag
aatctgtatcatttttagtgctaatttttaaagcaaccaaatcaagaatggtgggaatat
gagtccataattattgccatataaaacgcgtgtaaagcaatcttctccaaagacccacgt
atgtggatttgaaataatgaggaaagcaaagagcagttgagaaggaaggtatgacatgaa
taggtactaaaagtaagacagggagggtatgtttgagcccacaatgaggctggctgaaga
taaggccaagctcattttgaggaagaaaaaacaagagtccttaaacctaaaagtgttcga
tctaaaagatctcaggcctcagtgcttatcctagccacaacctgagctgagctgactcac
tgggaaagccagtttgacttcctactgcgcactgggcatgtgtcataaaacatcagctgc
ttcctggtctggagaaaggcccaagggtctgagagattgcacaaggtaacccaccgtaaa
acaagcatggacaccacctcttctaaaatgctcagagacacacacaagcaaaatcagttc
ccctagtatgcccacagggtttgcaaggtgtctcatggcacagttcacactcctgtcatg
tggtcagactttccaaattactaagacatttggcaaagctgggtcttacatcttctgtcc
agggactcttctcctgccaggaagggaggagaggctgaaaagggaaatctgaggctgtcc
attacagcccacttctgtagtctcctttcggctctttcctcccccaacctgctgtgagtc
aaaacaagctcaaccttgtgtgtcctaacataccatgtggtactagtagcatctttctga
ataaacagctaaataaagagcatttgcttggaagtctgtgagaaaagaaagggcagccga
gtggcttcggctcactgttggtggcacttcgtttgcatctgtaatcaatatgagcctcag
aagtgaaggtgcatggattcagctccccttagctggagcttacagtttatgtttgacttt
ctatcaactccatccagatcatctcttattatcttttctataatgctccaggcttgggct
ctgaggaggaccaagtggaaaggacagcacgcctctgggatacttagtgagcaactgaat
atttaggtgctctggctcgtgctctgctccctcttttagtaaacatttgggaggtttgct
cctggatctttgcaatttgcaaagatactctttgtgctcagaaaggcaaaacaagacaga
cgaggtcaatgggggatgtgagatatcttgaataatcagttgaaacatccacatctctaa
ttcaaggcttcctttgatttatcaatgtcatatttcacattaaggtccccaacatccatt
ttcttcatttcctttctaattattgcttcccaactcaataatttgctgttacatagtttc
tgacgtcttgcatctagtttgttcagaaccttggaatgtgatgggggggatgggctctct
gttagaaaagccatgtgagttttcttttctcttcgtttacttttcctgacttctcctttg
tctcagtaattatgttcagcccagtggctaatgatgttgcaggaggagtatatggctttc
tgagatcactggcaaggggttgtagagaatggaggctcagaaatcagaaagctggattca
aatcagttttgccatttagaaggacagaagcttaggcctgtatttttaagattcagtcag
cgctatatccaatctcagagacttcacactggagaattccattctaggcaaactacagct
gactgatctgaactgctaagggaatcagaatggaaggacgtctgtttcctgtccctctgt
gtcaatgcaagtactgtcttttacttggaacaacccccagagcagctctccttgcttatc
ctctcccccattccttcctttgcacattagccaatgagccttttaggacataaatcagac
catgtcataccctgacactctgcaaaggctccatgtctcctgcagaaagatgaacaaatg
tcttaatagtctagttgatcccataaaacagccccagattgcctccgtaacccgcatccc
tgcttctgtcttctggcttattgctttcagtcttattgcctcttccctctcatttgaatg
gatcgattatgtgcctgctgcggggcctttgccctaactgttagcttagggggagctgtg
ccttgttcatcattacctcctggagaaagaatgagatgtgtgaggctcaggaatccaagg
agactgaagagactctgggaactcaggaagttactagatttatgaggcctgtcctcaagt
tataaaagcagtaaacagttgctgggaaggcagagattgtccagcggagctgacttctgg
gttggctgagagttccagagatgaaactttcctttgtcaccatttatgcctgagttgcct
gaccaattatagaactgcctttgagtcaactatgctcttgtaagcaaccacagcaaaaca
ccttggttcactaagctagacttggatggaattgttcctccagtggcaacatgtgaaaaa
ctatttgttcacgcctccccaggatgtcatcttaacatcctgaaatgctctgaatctgta
ccatgccccatcttctcgacatatcagacttcagcacagctccagtcggctattctgtga
acattgtcctcttggcatcatgaccatggcacactgctatactgttcctagaatgtctca
cgacccagagaacacagctggagctttagaagaggtatgccataaatcaacaacatggga
acacgtcagtgacgtttccaatcagtacagaacgagatcagtgagtaatctcacaacccc
ttacatttctataagacagacttgaggaacccctatctggcagagaagtgagcacctgcc
aggggcacctcttgctgccctattcacatctcacctttcccacacttacttctgcagttc
aggtctgactttccaacatccatggatgattagtttctgggaaaagtgtgagtagtcagt
tttctccaagagtacaggccctgtgctccagcagaagatcatacacctaagaatatttgg
gaattacaaatcgaccttgatttgggggagggagacataaaattgggtcagtaagggaag
tgggaatggaactggaaagggttaagagagggagggtaatatgattaaaaacttactgtg
ctgagttacccaaaaattacatgcaatgtgcatattaaagtacatatttaagaatggctc
cttcaataattcaacaacctcatggactcctcaacaatttactttattaaagagtttcac
atgttcattacatcattgtatgtctcaacagtcctgaaaggaaaaagacagcattcctta
atctcgagaagaaatctgaaaaatagttcctccaccatgacttctgtcattctctccaag
ccatccttacagtgtttttaaactttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgcccatatatgtgctaatctgtacatgtagaggtcagaagataattttgtggag
ccagttatctccttacatctctatgtgggttccagagattgacctcaaagcatcaaacct
gcactgtaaattctgttatccactgagccatctcacctccccaagccctctttatcagag
acagggtcattattgtagtacaaccacttgaagcttatccacgaatagcttacaaataaa
taagactcatactatgattattttatttgtttttgacaatttccaggggataactcctaa
tctactcttctaactggctcatcccttattgttctgtttggtgttgctataacagaatac
ccttaactgggtaatttataaaatcagagaaagtcattctttccaatttggaaagttgga
aagtacaatatcaaggtgtaatacctggtaaggggtgtcttgctgagttgtctcatggtg
gaagaaggaggcagggcagaccattggaagagagcaaggaaggtcccaatttgcttttat
cacaaacctcttgcaattataagtcaattcataagatctcaaacccagtctaacagtaat
gtagtaacataacggtatgtaagtaacataaatccattcaatccaagtaagagccttaat
gacctgctcacgtcttgggttgtttccttgtttgctgtttgtttgtttgtttgttcgttt
gtttgtttgttggaacagagtctagttaggtggcccttgatggcctggtactttctatgt
agataaagttagcctaaaactcttgacaatcagcctccacgtgctgtattacaggcctgg
ttctcaatcaccccttaaagttccaacctctcttagtagattgcactgagaactgacttt
acaacacatgacctttgagaaacaaattcaaagagaagtctatgtcatatatgtcctgcc
caggcctctgagggatgtgtacaagttgtcactaagacagatgaagaagccctagccctt
actactcattgctgcaccaacccttatttgtgtttttctctttaaaacacttgattaatt
catgtggaaaggaattggttctcacacagcacctgtgtcctctacaatttcttacatttt
acagcttctcattctaaggactataccaagtctctccaaaaatcattttcagataggtat
aggttttaattttaggtatttcttcctaagtcatgatactgatttttatcatgtttatcc
ttcaagcaaaatgtcatactaagaattctctttgtttTTTGGAGGGACACTCTCATT
Primer
(+)TTGTCTGTGAACTCAGCCTT
(+)AATGAGAGTGTCCCTCCAAA


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