Mouse element [ mm2081 ]Position: chr13:15,175,122-15,180,116 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: AW209491 - Gli3 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence TTAAGCCCAAACATTCCTGAgtatagtttataccaagattttttcatttcttcttctagt aggtagccaaaacgtctctataaaaagttctttaagtgtagacttttctctccatttctt ctccacttctagctccagtctttgataattatataaaaatctatatgtatgcgtaataaa attaattttaaaaagtgatgaagaagtaaatacatatacaactatatcatgtaagtgggt ctcaagactggagacatagttcatcttccttattagcatgcaataaagcgtgagatatga tgtaagagtctgacatcactccttgatatttgcatactcatgtgtttcatatggagaaag atttaaggccatgaagtcatgtgtttgaatacttggtccccagttgattgcactgtttga gaaacattaggtggtatggccttgttggaaaaggtatgttactgggggcaagtttagagt ttcaaaagatgtatacaatccccattgtctccccttctctgcctgtggtttactctagat gtgacttctcagctactactcaatttcttcattactacttgcccatttccatgcccctga gccccatgatgggccatggaatctaaatcctttaaaactataacccctaaattaaaagct ttttgaaaagtaacattagtcatggtgttttatcacagcattagaaagtaactaagacat taacgtatctgataaaagctaggaataaatttattttcataagaaaaaaatttttgctta ataaaaacactgtaaaactgagaacaaaagaagtgaaatttatgaacagaaacttcatag aaaaattataccaaaaaggaaaagtttttctttttagttcttccaaatatttatttaaag ggaaatgggtttataagtaatacaattattcacaagagttctctttacaattctgcaggt ttttcttgtctggggagtatgctaggaatgtcttcttcataagatttgtaccttggagct agcctgcctgagcttgctcacctgtaaacagcctccctaaagtaaatgtgcaagctgccc cacaaaactttctttgcactcctgagagtagaaacaccatttccataccatgtaaaaaca aaacaaaaacaaacaaacaaacaaaaaacaaaacagaaaagccacagtgagtgtgactta tatccagaatctaaacatatgggaagaccctctagcaccagtcactttcatctacagatc tacactttttttctctaaggaactctagaatgaaatacaaaggaacaggttcaagaaaac catcacatttccttgaatattagtcatcatcatggtgcaggagagattgctaaaggagaa agacagtggagaaaggggagctgaaggaagaaaaactgaaatatggagaaagatttaagg ccatgaagtcagaaagacctaatgctttgaacagtttgtaaaataaaataatgcctttaa ggagatgatggccctggaatgctctgtaaattatttcacaagtagaaagggaatgtgaca caaaagaaaaataaacatgagagagggaaacaaacaataaacaaagcaatcgttgaaatt attggaatagaaaaggagaaatatgaagaaggaaaaggcaagaaatgttgagaaacaaag agaataatagggaaagagactttattctcatcaaagttagacacagagaatttataaaca ctgtatccaaactgctaatggatgactagtgatgacacaaagagtatgagctttgatcca gaaacgtatctgctagtggtgcctagagatgacatgaagtgggaggggctttgattttga aactcattttcctaccttaggatatttcagaggaaatcaatgtcccaccccgctctgaag caaatttcctcaagaccacagcataataatagaacttttcggtcttttctgcaagctgtt aaatgaatttctccattctattttgtgtcttcacctaagagagaattttaaaaaggtgct cctgacacacaagccacaattgaactgatgagagcaagggaaatggccagctattgcatc atcagattgtgctgctgtaactgaagtccttacataaccaccctgcaaatggcattggga ttatggaactctacttcctatagatgtcccattagcataacaaagaataaaacccataga aaatgtgcctttactgaggccccagaaaaatcctacatttaatggctgaactcattattc agagaatgtattttcatcttctaaagactgattgtaacagaagaaatctcccttctgtga tgctctgataaaatctgccccatcacactgccaggagtatttggcacacatttgataatg tatgaagttgtgcagacagtatagtgaacataagtcctaaagagcctatgagcaatggag tgggaagaatccctgagatgaggagaaaatggagagtgaattctgattgaatcaggcaat atgaccaagaaactttaacctatggggcaaacatgaatggctgtttccattacaagtgtt aactttatgagtttttctgaaacctacatttgacctctgttctgaaattcagtctgcact ttgactatgccctcaataaggataattccaaaaattaagatcttcagggtctggaagatg agaaggatttgtagaatgacaagagttctactctctcacatgtgcatccagccttgaaaa attaaaatttatttatttttaataaagaaataattatataatttccttctatctccttca tccaaactcttccatgcccccactcccattgcaaatttattgcccatttttctttctttt ttctttctttctttctttctttctttctttcttttttttttttttttaagacagggtttc tctgtagccctggctgtcctggaactcactctgtagaccaggctggcctcgaactcagaa atcttcctgcctctgcctcccaagtgctgggattaaagccgtgtgccaccactgcccagc agcccatttttaaaagttattgtagttgttggacccatttactactacttgcaatgtata tgttttaggaatgaccactcagtattgaacaagcaattatggaagtcatcccttgagaga actaacttgcacactctcagggctgtcttcaattgtttgcagttattcatctggaggtgg gactcctggagactttccatcatcaacattagaatatcacctgttgtcattgttgaggtc ttgtttaaacaaccacatcgttgcaatttcatgcatctagcttccttgtcatatctagaa aacacaatcttgcagctgttgccttggtcctctaagacttagaatctgttaactcttctg ttgtgtttcctgagtcttaggcataggagttgtgttgtaggtgtatcatttgggctgggc aacccacaggcagttttcttctgcatgtaagtagttggggctcccttaatggtctctgta tcccataaaaaaaaagataaaaaagattctttgatgcagggtgaaaactacacttatttg tgaatataaaaataagcttttagaatatcgttaaaaattatattggtttaggaaagtggt agttgtaggttctcatctaaaatccatgtcttagggttactaatgcagcaagttagggac aaaagtgttggtttggcttacacttccatatcgtccttcgttgttgaaggaaatgaggct aagaactcaaacaggaaaagaaccagaagtaccaggcatgatttccctcctgttcagttt gctttaactccagttagacaattgctggttaccactaaatgtaccactattacatctttc agtgaaccttgcaggatttgtaatttataggtatcatggcattctcctgtccacagcttc cactgtattttgcaacattatgaaagctagtccttagagaagaggatttagacttaaatc ctattggaattctcaaactaatgtgtccacaaagttcatagtgttttcaaaaatctccaa attctatttccagtttgcctgttctgaaactactcctctagttcaccaacttatgttcac aaattatgccaagtgatataaagattgtcaattgactaatggggagaaattttagacaac atgtgtgcctgctactccaggttcttagggtgtttgagtttgtgtccttacttctgcgta gagtcactattttgtcctatttttgtgttgctatgaagtgtctaatgatgggaaccataa agaaatgaggtttattttaattgtaatcctgtgactttaaagtccagactgcatggcaac accatctgactgtgcacaacattgaaaagaagtggaaaaggagcttaccttacaccgaag tgcacatacacagggagagaagcaagatactggaaagggaccaggctcagctttgaaaac aacccattttctcaggaactaatccagtccccatgatctgatccaagagatagcaagagt aactcactcataaaggttcaaccccatgatgaattactggtcactgggtttgtatctttt caatcccacccaaccacaccacaggaatattctagcatataattctttaatgagcaattc atagccaaactacagcacacattactccacaggtttcttccactttccacattacaaaag acaactttcctaagacctaaaattttaatacattttcttatgtattaaaatttacaacag agtgcaactagaaaataatgagactttctatgggggggggatgggactattttttatttt tgatctccacagttctttagcttgtaagtattcttaaatataaaaaagaataagctatat cagtaagtaagttaattctatatccagcaggaaaaaagtgtttcttctggctttgCTCTC TCAGATCTTGCTCAGPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.