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Human element [ hs2068 ]


Position: chr17:57,863,149-57,864,776 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: VMP1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GCCGACCATTTTAGGTTGAAtatttcctcaaaggctattttatagtttctgaatttaatc
tttttttaagggaacatttttaggttctatttaggactatagtaattaatgtaattaata
atcaataattgctacctactctgtatgttgaagctaaatccccaaattaagttttaatac
tagtatcttttaccttactaatttctattaaatttaaggctgaaaaaaatcttatttttt
agcttaataggatctttgtcctattcagaagttttgagttatttacattattttactagt
gaaaatataaaaccaaaaaacagtttattagttgtaatggtagttctcattcttatggcc
aatgccttttttttaatgcagtaaaacaaaatagacatttatctagcgaacatccctttt
caaactatagggtcaaagtgaaggattcttttgataatgatagaatatgtgtttgatcat
ttgagtttaaagactatgggaaaggaattgataagattatttaaatactcacgaaagtgc
tttggcattccactaatgctattctcttttaagcacattttcctatgaagtgtgtgcggt
tgcagttgcctacaccatgtcaatgcctgctggtttttcctgctgtgaagtttttccttt
acatacacagattcatgaaagagtttatggtgtagatgatctgaaactaaacaggacaca
ttttcatacactttagtaccatttgaagactctgggtgtcagttgttgctgggacctgtt
tttgactctgatgaacctttactggttgtggtttgtctggccatcacatgacttctctga
aaattccccctccccttcatttccagtaaactgtttgagcaggagtgagtcacagtgaaa
ccagcttccctgtaaccacagggcttgttaaagaatttgtcagcgtggactctagagggt
ttgcattaagctttgcagtaactgttatggtttgtgttgcgtcaggagttccacagaaaa
gcttcctgcttgcaggatctcttgcttgtttgcaaagagttaaactgatcaactttacca
tagtgaacatgagagacacatgttaaacacacttctttatcattaaaggcgttgtcaaaa
ctaccaagaattagtgtagtttctcttttcataatcaaccaaccacacccaataatgttt
agtttttgaaaaggcgggcctggtagatagtctttcacagttggctcatgattttatcac
aaagtaccatcaaaattaagcaattttaagtggtcttgatggattctgttacaggatatt
ttgactattcgcacagttaggtgtcggtaccaaaggtcacttacttgcactttgttcatc
aagaaaaggtagcacttagagtaattctggagttgtgatgtctaagcacacttagcatga
tttatagtggaattcttcgtgcccccttttacttgctttctctagaagcatttactttat
tttgaactcttttgccacctcactcgcagactttaatctttctcccttttaatttcttct
atttctttaactcattcccatattatcaacaaggaaagatagttGCAATGTGATGCAAGC
TGTTaaat
Primer
(+)gccgaccattttaggttgaa
(+)caccaacagcttgcatcacattgc


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