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Mouse element [ mm2064 ]


Position: chr13:14,816,130-14,821,372 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: AW209491 - Gli3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ACATTAAAGCAACCATCCATcctaaccaagtaggttttattccagggatgcagggatggt
ttaatatacgaaaatccatcaatgtaatccattatataaacaaactcaaagccaaaaacc
acatgaacatctcgttagatgtggagaaagcatttgacaaaatccaacacccaatcatga
taaaagtcttggaaagatcaggaattcaaggcccatacctaactatgataaaagcaatct
acagcaaaccagtagccaacatcaaagtaaatagtgagaagcttgaagcaatcccactaa
aatcagggactagacaaggctgcccactttctccctacctattcaacatagtacttgaag
tcctatccagagcaattctacagcaaaaggagaccaaagggatagaaattggaaaagaag
aagtcaaaatatcactttttgcagatgatatgatagtagatataagtgaccctaaaaatt
tcacctgagaactcctaaacctgataaacaacttcagtgaagtagctggatataaaatta
actcaaacaagtcaatggcctttctctacacaaagaataaccaggctgagaaagaaatta
gggaaacaacacccttctcaatagtcacaaataatataaaataccttggcgtgactctaa
ctaaggaagtgaaagatctgtatgataagaacttcaagtctctgaggaaagaaattaaag
aagatctcagaagatggaaaaatctcccatgctcatggattggcaggatcaacattgtaa
aaatggctatcttgccaaaagcaatctacagattcaatgcaatccccatcaaaattctaa
ctcaattcttcaacgaattagaaagagcaatctgcaaattcatctggaataacaaaaaac
ctaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatcaccatgcctg
acctaaagctttactacagagcaattgtgataaaaactgcatggtactggtatagtgaca
gacaagtacaccaatggaatagaattgaagatccagaaatgaacccacgcatctatggtc
acttgatctttgacaagggagctaaaaccatccagtggaaaaaagacagcattttcaaca
aatggtgctggcacaaccggtggctatcatgtagaaaagtgtgaattgatccattcctat
ctccttgaactaaggtcaaatctaagtggatcaaggaactccacataaaaccagagacac
tgaaacttatagaggagaaagtggggaaaagcctcgaagatattggcacggggaaaaatt
cctgaatagaacagcaaaggcttgtgctgtaagattgagaattgacaaatgggacctcgt
gaaactgcaaagcttctgtaaggcaaaagacactgtcaataagacaaaaaggccaccaac
agattgggaaaggatctttacctaccctaaatcagatagaggactaatatccaatatata
taaagaactcaagaaggtggactccagaaaaatcaaatatccccattaaaaaatggggct
cagagctaaagaaaaaattctcacctgaggactacaaaatggctgagaaacacctgaaaa
aatgttgagcatccttaatcatcagggaaatgcaaatcaaaacaaccctgagattccatc
tcacaccagtcagaatgggtaagatcaaaaattcaggtgacagcagatgctggcatggat
gtggagaaagaggaacactcctccattgttggtggaattgcaggcttgtgcaaccactct
ggaaatcagtctggcgtttcctcagaaaattggacatagtactaccggaggatccagcaa
tacctctcctgggcatatatccagaagatgccccaactggtaagaaggacacatgctcca
ctatgttcatagcagcctcatttataatagccagaagctggaaagaacccagatgcccct
caacagaggaatggatacagaaaatgtggtacatctacacaatggagtactactcagcta
ttaaaaagaatgaatttatgaaattcctaggcaaatggttggatctggagggcattatcc
tgagtgaggtaacacaatcacagaagaactcaaatgatatgcactcactgataagtggat
attagcccagaaactcagaatacccgagatacaagttacaatttgcaaaacacatgaaac
tcaggaagaatgaagatcaaagtgtggacactttgctctttcttagaattgggaacaaaa
cacccatggaaggagttacagagacaaaatgtggagctgtgatgaaaggatggaccatct
agagattgccacatccagggatccatcccataatcagcttccaaatgctgacaccattgc
atacactagcaagattttgctgaaaggaccctgatatagctgtctcttgtgagactatgc
cggggcctagcaaacaccgaagtggatgctcatagtcagctaatggatggatcacagggc
tcccaatggaggagctagagaaaacacccaaggagctaaagggatctgcaaccctatagg
tagaacaacattatgaactaaccagtaccctggagctcttgactctagctgcatgtgtat
caaaagatagcctagtcggccatcactggaaagagaggcccattggaattgcaaacttta
tatgccccagtacaggggaacgccagggccaaaaagtgggagtgggtgagtatgggagtg
ggggagagggtttgggggacttttgggatagcattggaaatgtaaataaggaacatacct
aattaaaaaaaagaaaagaaaaggcatgctcttatcaattaattatccctgtcttttttc
cacatccttggccaccctcctgtagtggaggctgctatccctagctgtcccgatgccttg
cattgtccctttttcttcaaggcatggcagaaaaagcccctctatccctgtgtttgcctt
tttttccttgagacctagaagtcccaactgtacctttcgtccagcaattgactcccagcc
ttctttattgacaaaatcaagaaccaattagcgaactagatcttagtacttagtattttt
aaccacctttctccttcagggatggttaaatacataaacacccatcaatgtaatccacca
tataaacaaactaaaaaaaaaacccaactatatgattatttcattagatgctaaaaaagc
ctttgacaaaatccaacaccctttcatgttaaaagtcttagagagatcacagatataagg
tatatacctaaacataataaaagcaatatacagtaagctaatagtcaacataaaattaaa
tggagagaaacttaaagcaagtctactaaaatcagggatgagataaaggctgctcagtgt
ctccctatctattcaatataatatttgaagcaataagataatatttagtagcaataaggc
tactaaaggggatcaagaggatacaagttggaacggatgaagtcaaagtatctttactca
cagatgatgtgatagcatatttaagtgaaaccaaaaattctaccagagaactcctacacc
tggtaagcaccttcagcaaagtggcttgatacaaaattaactaaaaaaaatcagtagccc
ttctgaaaagaacaataatggctcaggctctaagaacaacaattgataagtggaacctga
taaaattgaaaagcttctgtaaggcaaattggatgttagccataaagtacaggatacaca
cgctacagtccacagatccaaagatgctaatgtaaaaggaagcccaagtgaggatgctta
aatatctcttagatgtgggaagtagatggagggaggggaatgagtaggagaacatattgg
ggagggggaatttcaggatcaggtgtatggagagagaggagagagggccagagggccagg
agaatgaacgaaaatccgaagctggaagagtttgagggagggggcggtgggccaaagctc
aatgagtagaacttgctagagacctgctatgggagaagctcccaggaatcaggcaggatg
atattagcggagactcacagcagtggggttagggaacctgaagagatctcctgtagccag
acaggaattccagtggagtgatagggataccaacccacccacaaagctttcagcacagaa
tttaccctgtgtagaagggaaggggattgaccagaggtctagaagagatgcaggaaaggg
gattgagcggaggttgagggaatgggcaaacactaaccagcccaacttgagacccatcct
ataggcgtgaaccaatcaatccctgaccccagtaatgattctttgttgtttttgcagaca
ggagcctagcaaggctgtcctctgagaggcccacagagcagctgactgaaacggatgtag
agacccacagccaaacattgaaccaaactcagagattcctatggaagagttggggaaagg
atggggctccaaggaggataggaattctactgaaagactaacaaagtccactaacctgta
cccttaggggctctcagaaactgaactagcaaccaaagagtatacacaggttggacctag
gcccaccctgaatatatgcagcagatgtgcagcctgatcttcatgtaagttccccaataa
ctagagcgagggtcatccctaaagctgttgtctgtctggtatatgttcccctaactgggc
tgccctgactggcctcagtgggagaggatgcacctagccctgcaaagactatgtgtgtaa
gagagtggttacacaggggcctcggccctttcagaggaaaggggagaggaggtagggaga
gggactgtgtgaagggaggattcgaggggtaggaatcagtatgtaaagtgaataaataag
attttaaaaagaaaattaaaaatttctagtcattcatatatatatatatgaatggaaagt
attttctcctattctgtgggctacctcttcacttgattgaagtttctgttagtatgaaga
agcctttgaatttcatgagataggagtgctttaacagaaagattttgtacttgctactta
aacctggtcaaaaacatagaactaggatgatgataggctctagaagttttgctaaacaat
gatgctgtcgatttgctttcaaatttttatgtttttacacagattttttgttgttctcaa
tttTGGTCAGAGAAGTTTGACCA
Primer
(+)ACATTAAAGCAACCATCCAT
(+)TGGTCAAACTTCTCTGACCA


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