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Mouse element [ mm2061 ]


Position: chr13:14,850,845-14,856,161 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: AW209491 - Gli3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
AGAATTGGAGACCCAGAAATGAacccacacacctatgttcacttgatctttgacaaagga
gctgaaacaatccagcattttcaacaaatggtgctggttcaactggtcattagcatgtag
aaaaatgcaaatcaaattgttcttacctccttgtacaaagttcaagtccaagttgatcaa
ggaactccacataaaaccagatacactgaatctaatagaagagaaagtggggaaaagcct
caaagatatgggcacaggggaaaattcctgaacacaacaccagtagcttatacttcaaaa
tcaagaattgacagatgggacttcataaaattgcaaagcttctgtaaggcaaaggacact
gtcaataggacaaaacagcaacctgcagattgggaaaagatctttaccaaccctacatct
aatagagggctaatatccaatctatacaaagaagttagactccagaaaaacaaataatcc
tcttaaaaatggggtacagagctaaacaaagagttcacaaatgaggagactcaaatggct
aagaagcacctaaagaaatgctcaacacatttagtcatcagggaaatgaaaatcaaaaca
accctgagattcttcctcacaccagtcagaatggccaagtctaaaactcaggtgacagca
gatgctggtgaggatgtagagaaagaggaacactcatccattgcttgtgggattctaatc
tcctacaaacattctggaaataagtctggtggttcctcagaaaattggacatagtaatac
ctgagaaaccagctataccactcctgggcatatacccagaagatactccaacatatacta
aggacacatgctccactgtgttcatagcagccttatttataataggcagatgctggaaat
aacccagatgtccctcaacagaggaatggatacagaaaatgtagttcatttatataatgg
agtactactcagatattaaaaaacaaatttatgaaattcttaggcaaatggatggcacta
gaagatatcatcttgagtaacataacccaatcacaaaagaacacacaggtatgtacttac
tgataagtggatattagcccagaagcctggaatacccaaggtacaattcacagaccacat
caagctcaagaagaaggaagaccaaagtgtggatactttggtccttcttagaaggggtaa
caatatgcccatgggaggagatacaaagacaaattgtggagcagatactgaaggaaatgc
catccagagacttccccagctggggatccatcccatgtacagtgaccaaacccagacact
tttgtgaatgccaacaagtgcttgctgacaggagcctgatatagctgtctcctgagaggt
tttgccagtgcctgacaaatacagaggtggatgctctcagctaaccattagactgaacac
atggtccccattggaggtgctagagaaaggacccatgagctgaaggggtttgaagtccca
taggagaaataacaatatgaaccaaccagtacccccagagttcccaggcactaaaccacc
aaccaaagagtacacatggagggattcatggcttcagttgctatatatatcagaggatag
ccttgtcagtcataaatgggaggagaggcccttggtcctgtgaaggcttgaagtcccgtt
gtagggaattggcaggaccagtaagtgggagtggtttggttggtgagcaggggcaagggg
tggggataggtggttttcggaggggaaaacaggaaaggggctaacattttaaatgtaaat
aaataagacctctaacaaaagtttggggttttttttttaatccttaaaaacagtaacttg
taaaatccaaatgtttatccagaaatgtgacattatagtacttggaagacaaatttatac
ttcaaaattattaaagtaaatgtaattttcagactatctatatccacaactggttggtta
agtttaaaacaaaccaagtagataagtaacatatccattttacaacatgtgtttaacatt
gagtagaaacttggagatttagattcactttaaaattgtccacccgttcatatctcagat
tcaaaaatccagtagatacagacaggataacaacttactaaattttgcttggaaccatta
ttgactggtatatcatttactaggcttgccacatctacttatagtgatagaatttaattc
taattacaaatattcactgattcaattacatataaattgtgctgctcaggccactgttga
gaaatgaaagaaagctggagagctagttcaatgagtaaagttcttgccaggcaaacaatg
agacctagaatatggattcccggagcccacacaaaactaggcacagtggcacacaactat
tgttaggggcctggggaaagagttgacagagatgccagtctagccaaatgggtgagatca
ggttcagtgagagaccttgtcttaagaaaggtggagagcaattaaggaagacattactaa
ccttttccctcaatacgtacacactcacattaatacatatttactcatatgtgcatgcac
tcgcacagaatcacactcataaggacacacgtatccctctcagctatatgtagagaaaga
gagacgtaaagaaatgtaagcattgttctaattcagtaatctaacataaaacaagtcaca
ttcatattgtggagataaaaccattgcaacatgctgttcagattccagaggcaatacaca
gaaagcttaggaccttttcaatattgtttgatgcactttgttaaaatttaagttatggga
atatgacttacatctctgcctgcattgtgaatatatttgtatacgtgcaattctttgaac
ccagtagtgagcataaattgccattcatgtaggacactgcttattatctaattagcttgg
aaaacaagataaattttgttttagaaactttttctcgggatctcagaacttgctctggaa
ataaactcaaagcagatgctgcagttttcttgaactacaattagagtaagatcaaatgta
tggcaggttttgaatgccttgtttcagccttggtccatagtttatgttgctctgtcactg
taaatctttccacttgcttgtgggcctttcctgtgttagatctagtcttcaacatgggta
cacagcttctgcagaaaagcagtcaattttggaagtttccatgaacttgtgggtcttatc
atgtgtcctatcttgtctacaccatgggtccagaaatcttctcttttataaagatataga
agtatatactaaattatattaaatatattaacagattatataattatatataatatatac
ataatatatacagatattaagtttaaaattttaatttatgcaaatagaagacctaatgct
gtgaaattagattcaagatgcattccacccaaatgaagtagcttaaatggactcaaataa
tacttatctgtgtgttatgatattgagttgaacaatgagacaatatggtttagatatatg
tgctctacagggatactttgcattatttatgtctatatcacttttatcaagtaaatgaac
ctgcagcattgattaagaacaaattaagttacgaggtcataatttgattatatcactaag
aggatagatttattagagtagcaatactgagagtgtaaatagaatcagtccatagaaaat
gcattattgtaatacttttccagctacagagattgaatacctcttggcttgagagaaatg
gcgggagtctgaagaacaagtttgagaacgattgtaatatatttaaaatagctacatcag
tggtgattttagttgtgatttagcacatacaacacaagtgtagaaacatcccgtgactaa
cttattgagctgcaaggaaatctagactatgttgtattagcttatgactgacaaaataaa
gttggggcctcagtcttaacagaaattttccaaatatcattacacattaatctaaagaac
tccagaagcacagttttaaaatactgctctaagtgagattggtctgaaattttctttcat
tgttgggtctttgtgtgttttaggtatcagagtccacctccagtacatagatagggactc
aagtggtagaacaggattactaacctacagtcaaaattcctgacccagaattgttcctgt
ctaaaagaactacagggccaaaatggagaagagactgaaggaaaggaggttcaatgactg
gcacaacctgggattcatctaatggaggggcaccaagacctgacactattactaatgcta
tagtgcgcttacagaggggcgcctgccatggcagtcctctgagaggccctaccagcagct
gactgagccagacctagatacttacactcaaccattggactgaagtcagggacccaatgg
ctgaattagggggaggattgaagaagctgaaagggagagcgaccccacaggaagaccatc
actctcaactaatccagactccatggagctcccagagaatgagccaccaaccagaagcat
acacgagctgatccaaggcccctggcacatatgtagcagaggtctacctggtctggcttc
agtgggagaagatgtacttaatcctcgagaaccttgatgctccagggaaggaagcagcct
ggtgggcagagggggagagcaccctcttggaggcaaggggaaggaggaatgggatgaaga
actgagggagagggtgttggtggggcaatgaccaaaatgtaaatatactgctctagaatg
actttgaaaccatattcgttgggttgttgttctcttttttccatttcccctctcatggga
ctactgtattgacaaggctagttcttctcctaaggaaatgtattccttttcatttgtttg
tttggtgtttttccttttatagaaaatagaatttggatcttggtccgagacccgccgaaa
ttaggaaattagtctgaacaggtgagagggtgcgccagagaacctgacagcttctggaac
aggcagaagcacagaggcgctgaggcagcaccctgtgtgggccggggacagccggccacc
ttccggaccggaggacaggtgcccacccggcaggggaggcggcctaagccacagcagcag
cggtcgccatcttggtcccgggactccaaggaacttaggaatttagtctgcttaggtgag
agtctgtaccacctgggaactgccaaagcaacacagtgtctgagaaaggtcctgttttgg
gccttcttcttcggcCAGGAGGAGGTCCAAATACAAG
Primer
(+)AGAATTGGAGACCCAGAAATGA
(+)CTTGTATTTGGACCTCCTCCTG


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