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Human element [ hs206 ]


Position: chr3:70,565,242-70,566,852 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LINC01212 - FOXP1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
atatGTTGATTGCCGAAGGTGATTtttctgacgaatcccacacattcgtgggaaacaatt
tgtctttgtgtcagaaggaactccttgaacaacttggggtgaggctagagaacagcagca
catgtttgcctgaagtcttacctggagatatggccgggcttatgttacacaggcttcagc
tgtataaatacatcatgccatctgcacatggcaggggaattgagcctgtggaagctcaag
acctgtgtcagtgttttcacagaaggactgtttatgaacagatgttatgtggtgtttttc
acagaaaatggactctggagagagaaaatgtctatcaattactgaggtattatgtataac
agcaatttttaaccttgagaatacttttaaagttctcggtaaaatattttcaactgtggc
cactttctttgtctcaacgaggattcaacctcttgtcgtgggcgcacttcccattgtaat
gttctttggagatctctcagttggtgagattgtgttctgtctgacacaaggtacacccaa
tgttctgatccattcatgactgcaaaacctttcaatctgtgtggaaactgcttgtcattt
tcttctcttttcttttcctgataggataagactttaaaatcaaactgtaggattgaatga
ccatttaggtttccttgttatcatgtgttcttgatgtttttcatgtaaaaagacatggta
attgatctaaatgttaattatgctctggacaattaagcattcagagatctacaaaataaa
tttattctctatagcatgcttcctagattaaatctaagacacttaccatgaggtggaggt
ccagaatgcttcagggccagcactccagagatggaattatctccaacagccacaccaaga
gcactgaagcccctttgtgacctgttgacagacaccatgttttgcataatatatatattt
tcattttcccttagctttcttattatttattcaataaatccttttttcttgctgacagca
gttgtatttataaagctaaacccaacacagcaaaatgttcatcactttataaactaaatg
ctaatgttttatttatgtgcaatgaagaaagaaaaaaagaactgaattgatgtttacctt
acaagcagcacaaaagtgcagtaccataatagtggagttcataagcattctggcttgtaa
ttttgggtgtcaacatttgaattgcagaaagagtttatgcagacatagcacgtacacaag
tgcagtttagatccacatctataaaaataacatctgtttaagcatacattacatttaaaa
ataactgtacagtgatcagctggttaagtacagttaaccagatgtcgttttaaagggcca
gatggaactatgaaactaagattgaaaaattaaaaaatactgtgaaaggtcaaaccaatt
aagcaacctgttttgttggcatgtaacagttaaaaagtaagttaaactacttaaggagtg
agcaatatgaagatgtagcagttaaaaccaggtcttgctcctctgaggacaaagagaaaa
atccaggctagagttgctcacttactggaacTCAGGCCAACATCAGAAATG
Primer
(+)CACCGTTGATTGCCGAAGGTGATT
(+)CATTTCTGATGTTGGCCTGA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.