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Human element [ hs2054 ]


Position: chr5:133,772,017-133,775,320 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC102546229 - LOC101927934

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CTCTGGGTGTGTGTTTGGTGagtcctttgcctttggtttctaggactcatagagaaatga
cagacccttcctactgcatttaattggagaggagcacagagacctgagattataatgatg
acgtcttaaatgtcaagtgcttcaaaagtctgctgttgcactcactgtcaccctaaacag
ctctggaaaccaaaaccctgcagccacctaaagcatgccctgagtctctcagccaggttt
catctgggaaatctgagtgacagtgacgtgcaggcagctggaagacgcacagtaaaccga
ggagcctgtgatgagctcagaggaggtgagttgatgatctgctatttatagccccactaa
gaggctctggccgccagctccatgtgagtctgggtggaaatgatgccttcgcagagctga
gagcacaaaatgaagttggtgattcatgggcagcagccacttgaaaatatgaacactcct
gcgtccccagccccgccggcctttcacacccatttggaggcgtgttgagcagagctgcta
gcctgctgcatcctagtctgcatgtgtttgggcaggatgtgaggacaggccggttctacc
ctgacaaggagcctgcaaagggcagcagcacgcctgggagcactccaagaacgtctgccc
accccccgagaggcctcggctggaacccagggcagggctgagtaagaggtaagccccgag
aggacctgcggtcacagagaaaggacacttcctgctcctgccctctgtctccaggggcga
cgctggcaacagagcagctttctgatgacgcttgttctgctgaacatacaaaaatttaca
atgaggaaacccttgcagcttgacatttccccccgcacaattccacagcccagcacctgt
cacctgaaatagctattgtttattttcctcagtaacatcttggcttccaggccaaagtct
acttggaggcccaaactcaactcaccctatgtgaggaatgccctggaggtctctcagttt
cccacaaccaaactggatttaaagggccaaaccaggataaggaggccagctgagctctga
agccagattgtctgggttcagattctttctctacacttgcagccacgtggcttcagtcaa
attgccctctgagactcagtttttctcattggtaaaatgaggataattacagaacctacc
tcactgggttgcggtgaagggtgacatttgagtagtggtcagcccagcatccagcacatg
gacagacttgatactggacactgctgctgctgcttttgctgttgaagttgttttcactcc
tgggttttggtccctgtactgatagcactcctttgcacacagtctatggcactgaggttc
cttgtggaggtggtgccctgaggcttcaatagagaccctctgcccatcacaaacaaaccc
catatcaggctgccaagcatagtggacttcaccccgggggcatctcagccccatgcttga
ccggcccctgcctttgcctaggaaccaagtgcctttcccttggggctgggctttgcccgg
gttgactaccctgatgcttctgctcctctatgtcctggggtggtcttgggggtattaact
gtcaccatccagtggagggtttcaccgagggtcccaggtgctaacatgaggtctgtggcc
agcaggcagcctggatgactggccggataggcagcagggagggcctggatgactggccgg
ataggcccacctcacctatgggctgcacttgcagcacaaactgctgattcatggagactc
atgaggccttggctatctgtacattctccatctccagctgtcggccaaaatataattgta
gttgtcactttggcagagagatactatgatgtgtcctatctccaaggcagtgagcttttg
gaagataggagggatctgcagctgctcctgtggagagaaccattctggaaagtggtctgt
gtgaagtgcacccaggtgcagtcccaggagtggtgtgagcagcagggtgaggccctatat
tagaatgggcactggtgttgcctgtgtctgcatctacagtaatgcaattctgatgacatc
aatgaataacagagaggctgccattgaaatgaggcattgttggcagctatgcggacttgg
aaaacagccaccaggcttatgcacaagtcagaatccatcgtgtgtggggtaaatgagtgg
ttagaccatggggtacatggtgtaagggagatgatgccagagacatagctaggaccagac
tgagaagcaagggactcgaagaccaggccatgcagcttggacttgatcctggacataggg
aaagtgatgtgattagaggatgtgggggttctgggctcaagcatcctcgaagggtcgcac
taagggcaaggctccccctccccacggcagttggcaagcagcggcttgctgtttgagaag
gtgtttactcctctggagcatgagtcccacactcagaaggtgctgagactctgctcgtag
ggtaagcatatgaagggccggtcccagccaggacagctgggagtgcgcagtcagcaaggc
aaagcaccaggcttatgtcttccctcttcttccatccttcttggccaggagtttattatt
gaagcacctgtgtgcagatgtgctaaatgtagatgactgcaccactcaggtcaaaggtca
gggaggctcctgggactgagagatgaccccgctgcctgtggatgtggcctccctccccac
taaggaaacagcagaggcaaacatccaagcttgcctgatggaggaattcctagaagaaag
gttctatccttatgtacttaaatactgatttagaggttggttaatggagacagaagaata
ctaagtgttgggagccgttaccagtggaggacccacccatgagcacggaagccagagcat
atctggaccatcatgtaagtccggaggaagacacgattcagttgacaaaaatttgtgtac
cctcctcagaagtgcattgttgtgcaagaaatggtttggcagtgactctcccctttcagc
tgcaagccatcaagggctgaatgcctctccagttgccagaggaggagtggcttgtagagc
ggatgttcccagtctggcagaatcttctgtcaagtgttccctgagttgggctgccagggg
gcaggtgttgaacagtgaggaagtcctctcacctgagcagcttctgatgcaagaggggtg
tcgtgagtgcctggaatcctatgcctgtgggtggagcgtgaacTTAGCCTCTTCCCTGAG
GGTa
Primer
(+)ctctgggtgtgtgtttggtg
(+)caccctcagggaagaggctaa


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