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Human element [ hs2052 ]


Position: chr1:230,280,348-230,284,066 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: GALNT2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CAGGATTTCGCCATGCTTATtttgtcttttcctgtttatgcctgtgtgtgtgtggtgggg
agttaggggtggtagtggtgtgttttaaagcaaatctcggatgttatttttcttcttgtg
atgcttacttcaaagtaagtaccactaaccttgtgccagtgttcttatgtggggtgagga
ttaattaaagactaagggatttgaagagcaactataaagtattaaaaagcctgggagtag
gtggttgatttggggcagaggttatggtgttgctgatacagtggcttctaagcttcttgt
gggaaggatgagtttatctttggcagccttcagtgatctccccgcaggccttgaggtgag
atgtgtagtgatgtcaggctcctctcttgcttggtaacctacaaaccaagcaaggtgaga
ggcccggcggagcatcccaagggtctcccgatggccactccagagctgcgtcatctgttt
tctgctgcagcatctgcaggctctcactcatcccgttacacttagagcgacccatgtgcc
tgtgggcccctcctgcctcagtaccaagactgtccttggcaccccctccccaaccccatt
ctcagatcgccccctgtgttgcttgttagcaggcaggttccagtgcagactggccgaatc
tgaatttctcagtgagcgtctcagaaatctgcactgtcagctcccctgacccctaagttt
gtggggtttcctggccaggcctcagactctggcagtcgggcctgggccttctgagggggt
ttgtcctggaaatcctgtcttcccccaagggaagctcccccaaaggaacccttttaggtg
tctggtgtttgaagccagtcccccatttccctctgtttttgttgttatcacatactgtag
ggatggttgtaataaatacagacttttagagaatgcagccaacttggtggttctctgggg
attcctccgctgaggtcggggcttagacatttacacggttttcttttgccttttgagatt
cttatccacagctagttggttgaaagccacccaccttggcatagtgccaatgggggcctt
gccccgtgtggtgcctgatgcagcacagcaggacgtcaggcaagcccagacgtcaggcag
gcccagaacgtcacctgtcttcttggtggcagtggttccatctggacttggaaataccat
gtttgaaacaaggtccctgtaattacttaattgtaaagaaatgagaggtagcatttcggc
ttgcttgcctgcctgcccagcccctctgggaagtgtgcctttcaaagatgctcgccgctt
gcatttttattatcctgtgattaagagagaagacgttggtccactccttgtccaggctgc
tttgggctgtagtggacctgcttctggtgttccttgaggttctgctttcttgtgagggtt
cttttttctctctgcttcttattaatctgtagctgcttatgttttttggcttggctaaaa
ataagcacttttccttcttcctcctgggttaggagtgaaaaagacagtctttgtatttct
gctgtttggagttggatgtgagaaattgataagctaaaagactgtagttatttttcccct
cccttttcatgtatctcgttagggagccctggaggaggaagctttgggaggagtcccgcg
ccttctctcccgcaccaggtctgagaacttgttcgcagctattcatgtcttatgtgtgcc
tggtcacccctcttcctctttcagttttgtttttttgttaatagctaaatcacatttctg
gttatttccttaatatggacagtattttcatttcctctggaggtgttgatcggaggccac
tgcctgcctcccttcctgacccggttggagtgaagcaggtgtgggctcagaaaagcctgc
ttgggaagcactcctgtgttcatttacaactcagccaccttataccaaccatacactgca
cactcagtattagatgagaaaggagcaaactcggctctcagggagctggggcatttagga
aaaggaaacaaattagtatagtaagatgcattaatgaaacggcattgggactaacctgga
gggatggcccaggttgcagggggaggggtgggaaggagagagggcatagggtgggtgtcg
tgcatgtaagtgaaatggcatgccaggggctgcacgcacctcagagcggccccacgtgtt
ggcggggaggcgttatgctggaaacgtgacctgtgaggaggttaggtaagaaccacgcag
ggtcctgtatgctgcagtccagagctggctaccgcctgcactgtcagatctcggtgtctg
tcccgctggccgcactgtgtgggagtcgtggcaggggacagacaggaggcaggtgggcca
ctagagcccaggtgagaagggaagcaggccttcagctgtggcagggtgaattgggaagga
ggggccagagttagagaaacaggaggcagtgtctgcatatctggccagctggtgagatgt
tggggatgaggggtgggcagtgccaagctgggggagatttcagaccatgattctcaaaag
aatgctctctgatttgacagcatcctcaatttggaggaattacctttgtgttccttccaa
gatgttgtccctggactgatgaactgaaaccctttcctctggcattttctagtttccaag
atcgaccgtgaattataaagacttcattttattcaacattcattgtgttcaaaccttcta
gctgaaagccgcctactttggggttaaggtgtgggtttgcctatattcactttgctgtcc
ttgactcttggccaacattcctagagcccctgccacgggactgctgtgggctgagactgg
tgtcgcctctcccttgaaagcatggcctgctctgccgtgtgcctggcttggccactggtt
ctcctttcctggtcccgcgggggcttttcttttcttctctgttgtaaaataatctcaggc
cagggccactcctggcctactcttcgattctgcgaacagtggctggctagtggtgtggcc
acattcccctgcagtggttgaggctaaacagtcactgttgagagaagctgccttcctcct
ccaagagtccctccttcctgccctgttgccctcttcccgttgaaggagagcttctgtctc
ctgagtgagggcctcagctctgcctgtgggtcacctctggctcccagcctggaaggcatt
gcaggcttcatgaagagagctcgtctttagctgctatttctaagcatgattgcttgttgg
aggttggcagtggtagatgctcctagcacacgtccacaccttcagggcaaacgctctgtc
cccagacactgtccctgtttagttagtttcctaaactatgatcactcagcaacctcgagg
atagtcactgtattattacatacaggtgcagccctcttacatacctgtgtgtgtgtccag
ccccactggacacatgcctcccacttgcccacactcttccccatcccgctttaaagcttc
aaatctgaaaagacagtggcgctgcgtggctgagagccacgaggtggactttaggtgaag
ggctgcccaccggcacaaccagatcagtggccagctcggggcgtgcacagtgcactcaga
gggagagccctgtggcactgcgttattttcctcctaGAGCTGAAGCCAGAAACCTGaTa
Primer
(+)caggatttcgccatgcttat
(+)caccaggtttctggcttcagctc


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