Human element [ hs2052 ]Position: chr1:230,280,348-230,284,066 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: GALNT2(intragenic) Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence CAGGATTTCGCCATGCTTATtttgtcttttcctgtttatgcctgtgtgtgtgtggtgggg agttaggggtggtagtggtgtgttttaaagcaaatctcggatgttatttttcttcttgtg atgcttacttcaaagtaagtaccactaaccttgtgccagtgttcttatgtggggtgagga ttaattaaagactaagggatttgaagagcaactataaagtattaaaaagcctgggagtag gtggttgatttggggcagaggttatggtgttgctgatacagtggcttctaagcttcttgt gggaaggatgagtttatctttggcagccttcagtgatctccccgcaggccttgaggtgag atgtgtagtgatgtcaggctcctctcttgcttggtaacctacaaaccaagcaaggtgaga ggcccggcggagcatcccaagggtctcccgatggccactccagagctgcgtcatctgttt tctgctgcagcatctgcaggctctcactcatcccgttacacttagagcgacccatgtgcc tgtgggcccctcctgcctcagtaccaagactgtccttggcaccccctccccaaccccatt ctcagatcgccccctgtgttgcttgttagcaggcaggttccagtgcagactggccgaatc tgaatttctcagtgagcgtctcagaaatctgcactgtcagctcccctgacccctaagttt gtggggtttcctggccaggcctcagactctggcagtcgggcctgggccttctgagggggt ttgtcctggaaatcctgtcttcccccaagggaagctcccccaaaggaacccttttaggtg tctggtgtttgaagccagtcccccatttccctctgtttttgttgttatcacatactgtag ggatggttgtaataaatacagacttttagagaatgcagccaacttggtggttctctgggg attcctccgctgaggtcggggcttagacatttacacggttttcttttgccttttgagatt cttatccacagctagttggttgaaagccacccaccttggcatagtgccaatgggggcctt gccccgtgtggtgcctgatgcagcacagcaggacgtcaggcaagcccagacgtcaggcag gcccagaacgtcacctgtcttcttggtggcagtggttccatctggacttggaaataccat gtttgaaacaaggtccctgtaattacttaattgtaaagaaatgagaggtagcatttcggc ttgcttgcctgcctgcccagcccctctgggaagtgtgcctttcaaagatgctcgccgctt gcatttttattatcctgtgattaagagagaagacgttggtccactccttgtccaggctgc tttgggctgtagtggacctgcttctggtgttccttgaggttctgctttcttgtgagggtt cttttttctctctgcttcttattaatctgtagctgcttatgttttttggcttggctaaaa ataagcacttttccttcttcctcctgggttaggagtgaaaaagacagtctttgtatttct gctgtttggagttggatgtgagaaattgataagctaaaagactgtagttatttttcccct cccttttcatgtatctcgttagggagccctggaggaggaagctttgggaggagtcccgcg ccttctctcccgcaccaggtctgagaacttgttcgcagctattcatgtcttatgtgtgcc tggtcacccctcttcctctttcagttttgtttttttgttaatagctaaatcacatttctg gttatttccttaatatggacagtattttcatttcctctggaggtgttgatcggaggccac tgcctgcctcccttcctgacccggttggagtgaagcaggtgtgggctcagaaaagcctgc ttgggaagcactcctgtgttcatttacaactcagccaccttataccaaccatacactgca cactcagtattagatgagaaaggagcaaactcggctctcagggagctggggcatttagga aaaggaaacaaattagtatagtaagatgcattaatgaaacggcattgggactaacctgga gggatggcccaggttgcagggggaggggtgggaaggagagagggcatagggtgggtgtcg tgcatgtaagtgaaatggcatgccaggggctgcacgcacctcagagcggccccacgtgtt ggcggggaggcgttatgctggaaacgtgacctgtgaggaggttaggtaagaaccacgcag ggtcctgtatgctgcagtccagagctggctaccgcctgcactgtcagatctcggtgtctg tcccgctggccgcactgtgtgggagtcgtggcaggggacagacaggaggcaggtgggcca ctagagcccaggtgagaagggaagcaggccttcagctgtggcagggtgaattgggaagga ggggccagagttagagaaacaggaggcagtgtctgcatatctggccagctggtgagatgt tggggatgaggggtgggcagtgccaagctgggggagatttcagaccatgattctcaaaag aatgctctctgatttgacagcatcctcaatttggaggaattacctttgtgttccttccaa gatgttgtccctggactgatgaactgaaaccctttcctctggcattttctagtttccaag atcgaccgtgaattataaagacttcattttattcaacattcattgtgttcaaaccttcta gctgaaagccgcctactttggggttaaggtgtgggtttgcctatattcactttgctgtcc ttgactcttggccaacattcctagagcccctgccacgggactgctgtgggctgagactgg tgtcgcctctcccttgaaagcatggcctgctctgccgtgtgcctggcttggccactggtt ctcctttcctggtcccgcgggggcttttcttttcttctctgttgtaaaataatctcaggc cagggccactcctggcctactcttcgattctgcgaacagtggctggctagtggtgtggcc acattcccctgcagtggttgaggctaaacagtcactgttgagagaagctgccttcctcct ccaagagtccctccttcctgccctgttgccctcttcccgttgaaggagagcttctgtctc ctgagtgagggcctcagctctgcctgtgggtcacctctggctcccagcctggaaggcatt gcaggcttcatgaagagagctcgtctttagctgctatttctaagcatgattgcttgttgg aggttggcagtggtagatgctcctagcacacgtccacaccttcagggcaaacgctctgtc cccagacactgtccctgtttagttagtttcctaaactatgatcactcagcaacctcgagg atagtcactgtattattacatacaggtgcagccctcttacatacctgtgtgtgtgtccag ccccactggacacatgcctcccacttgcccacactcttccccatcccgctttaaagcttc aaatctgaaaagacagtggcgctgcgtggctgagagccacgaggtggactttaggtgaag ggctgcccaccggcacaaccagatcagtggccagctcggggcgtgcacagtgcactcaga gggagagccctgtggcactgcgttattttcctcctaGAGCTGAAGCCAGAAACCTGaTaPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.