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Mouse element [ mm2051 ]


Position: chr13:14,933,670-14,939,129 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: AW209491 - Gli3

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
TCCACATTCTTTCCAGTGTCtgccatcatcaaacaaataaaagatctgtatgacaagaac
ttcaagtctctgaagaaaaaaatcaaagatctcagaagatggaaagatcttccatgctca
tgaattggcagaattatatagtaaaatgaccatcatgctgaaagcaatctatggattcaa
tgcaatccccatcaaaatcccaactcaattcttcatagagatagaatgagaaatttgcaa
atacatttggaataacaaaaaagccaggagattgaaagctattctcaacaataaaagaac
atctgggggaatcaccatccctgacctcaagctgtttacagagaaatagccataaaaact
gtatgatatttgtaaggagacaggcaggaagataaatggaatagaattaaagacccagaa
atgaaaccacatacctatggccttttgatctttgacaaagaagctaaaaccatccagtgg
aaaaaagacaacattttcaacaaatagtgctggttcacctggaggtcagcatgtaggaga
atgcaaatcaacccattcttatctccctgtacaaagctcaagtcaaagtggatcaaggac
ctccacataaaacactgaagctaatagaggagaaagtgaagaaaagcattgaacacatgg
gcacaggggaaaaaaattcttgaacagaacaccaatggcttatgctctaagatcaagaat
tgacaaatgggacctcaaaaaattgcaaagcttctgtaaggcaaaggacactgtcaatag
tacaaaatgataaacaacagattgggaaaacatctttgccaatcctacatctgatagagg
gctaatatccaatatatacaaagaactcaagaagttagactctagagaaacaaataaccc
tatttaaaatggggtacagagctaaacaaacaattctcagaatatttagtggctgagaag
cacctagagaaatattcaacatccttacttatcagggaaatacaaatgaaaagaaccttg
agatcccacctcacacaagtcagaatggctaagatcaaaaactcaggtgacagcagattc
tggcgaggatgtggagaaaaagaaaaagtaagaattataaatagatctattaaaaacttc
taatatacatacatacatacatacatgaggggccatgggtgttggggaaagagtggagtg
gaagagtgcccctgtcctgccagagttccagtgctctgggcagacggatgcaggaggact
gcacacactttccatgtggcctggggtgggcatctggctgtgttaagccactgaccccac
atggcaggtggtggacaaggggcagccccaggtaccaggttctcagtctccagcatccca
cactatatatcatggaggagctgagaacagaataggggccctggggtggcactcagccct
ggagttaagggaagaggtcagagggagaggcggcactaggtggttcctacacaggtgaga
gtccttagtccagtccgtggctgcatggctgcataggaagtccttcaggcgggaggttaa
atgctcactcattaggagaaagcctatcccatcgttcaatcacggtgggccttgatgaac
agagacagtctatggttttagagctttattgtagaaaggcagggagaaaggagagaaggt
agaaagagagaaggagaggctggctggccatggccacatggagagaagggggaagagaga
gagagagagagagagagagagagagagagagagagagagagagagagagagagagagaga
gaagaaaggctagagagtaagagaggtaaaagcttagagagagtgaggtagggccaagca
gcccctcttatagcagacttggctatcttgctgttgcttaaataactaggtgggaaggag
tctagctagaatgccagaagcttaggacattgtctacatgactggtagccacatgcctct
cctgtggggactatgggggcggtaacatcaacagtagccaggggtccaggagacatgatc
gaatgcctttggtcccatgtaggtggaaattaccacccacccggtcccatgggggctcaa
aacctcagcttgactggagaccaggctgtcagtggatagcccattgccccacacatacat
acatgtatacatacatacatacatacatacacatgtatgtgttatctagtcccttgatga
ttgctgtaacttcatattagtgtatgataacatcttaacatggaatcaaatgttctctgg
aggggctctaaaaagagtcttcctacctgtgaccagataatcaactcccctccaaaatac
aattctttggaacatctgcatttctttaaactaacccagagacatggtagtggagcatgg
ggtacttctgtaatatctgttgcttgtgcaagtttcttttatgtacaaagagaagaatcc
aattgaaactgaagatgctgtttcattaagtagctttaaatcttgtgtagtgtagtatac
acctatatacacagaaaaatgctgttatgttatatatatggtctagatataagattggaa
ttatttagaaaattcacatcagaactatctatcaactctaagagcagccatggcatttgg
acatttacaataactgtttggggaatctcctaacaaacatttttcatactgtcaaagaat
ataaactaccaaaaagttttacttaacaaatatatagttgtcgtagtcagggtttctatt
cctgcacaaacatcatgaccaagaagcaagttggggaggaaagggtttatttggcttaca
cttccatactgctgttcatcaccaaggaagtcaggactggaactcaagcaggtcaggaag
caggagctgatgcagaggccatggagtgatgttctttactggcttgtttcccctggcttg
ctcagcctgctctcttatagaattaagactaccagcccagagatggtcccacccacaagg
ggcctttcccctttgatcactaattgagaaaatgccttaaagttgtatctcatggaggca
tttcctcaactgaagctcctttctctgtgataactccagctgtgtcaagttgacacaaaa
ctagccagtacaatagtcatacagcgattaaagttacaggctttgaagtgggattggtat
agttttgagcatcattgactactacaggtcacttatacaaagtcatagtttcctattttg
taagaaacagagtacgatcaaatacctaccacgctatttaatcactgctgaacttgttca
acatgcatttatatttcaagtaaattttccaaatgctaaataacgactcctatttgtaag
ataactatcttcacaattgtttttagataaaaattggccagggtcaaaaccaataattat
aacaacaaaaacaacaacaacaacaaaatcatgacactttacagaatagggcttggagtt
gaggttctctgtgctttgtcactctctggattcttttagagacagtagttgtgctatgaa
tcagggatgatcttgttagacccaacataacctcaaaatccttctctcttgtttgcagac
atcaaatattctctgttttcttcattgcttatttaacagccatcatctgtagccttcttt
actcttacaggatttatcacatgctttaaaaactgttcttgatagactgaaatgaggtaa
tgattattttctgcttttatcatttcttccttgaagtttcctctttgatctttatgtctt
caatacaacattctctagaactcaaggaataacaataagcttggaaacagaaatgataat
ttatcctctcatcacacctgtttgatttattccagtagttcattgagttctttgagacac
aggccactattccacatgtggattacaggacccttgcagtctagttcctgtcttattctt
gacttgcttgtgtcttctatctggaagcttctgtaagactctcatgatccaatgctctct
ttgcttcagaatccttcctcagcctgctatcttgacttcaggagcacatctttctgccac
tgttcttcattcaagaacaagcacaggccctgattagtctaacatcatcttggacttcct
cttatctctgcattctggtcaggcactttcatttattttttttcttttacatctaaattt
tttaacaaggtattttcttcatttacatttccaatactaacccaaaagtcccccgtaccc
tccactccactcccctacccactcactcccaattcttggccctggcatttccctgtactg
aggcatataaagtttgcaagaccaatgggtctctctttccattgatggctgactaggcca
tcttctgatacatatgcagctagagacatgagctctgggggggtactggttagttcatat
tgttgttccacctataggattgcagacccctttagctccttgggtactttctctagctcc
tccattgggggctctgtgatctatccaatatctgactgtgagcatccacttgtgtgtttg
ctaggccccagcatagcttcacaagagacagctgtatcttggtcctttcagcaaaatctt
gctagtgtatgcaatggtgtcagcatttggaggctgattatgggatggatccccggatat
cacagtctctagatggtcgatcatttcatctcagctccaaactttgtctctgtaactcct
tccatgggtgttttgttcccaattctaagaaggggcaaagtgtccacactttggtctttg
ttcttcttgagtttcatgtgttttgcagattgtatcttgtatcttgggtattctaagttt
ctgggctaatatccacttatcagtgagtacatatcatgtgagttcttttgtgattaggtt
acctcactcagtatgatgacctccaggtccatccatttgcctaggaatttcataaattca
ttctttttaatagctgagtagtgctccattgtttaaatgtgctacatattttgtatccat
tcctctgttgagagacatctgggttctttccagcttctggctattataaataaggctgct
atgaacatagtggagcatgtgtccttatttgcagtgggaacatcttctggatatatgacc
aggagtggtaatgctggatcctccagtactactatgtccaattttctaaggaaccagcag
actgatttccagagtggttgtacaagctcacaatcccatgaacaatggaggagttttcct
ctttctccacatcctcgccagcatctgctgtcacctgagtttttgatcttagccattcag
gctggtgtgaggtggaatctcggggttgctttgatttgcatttccctgatgattaagaat
gctgaacatttttttcaggtgctcctcagccatttggtatTCCTCGGGTGAAAATTCTTT
Primer
(+)TCCACATTCTTTCCAGTGTC
(+)AAAGAATTTTCACCCGAGGA


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