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Human element [ hs2049 ]


Position: chr6:15,508,843-15,511,338 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: JARID2(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
ggCCTGGGATCACCTACCTCTGttggaagagttggggtgctggagaatgttgtaacactg
tctgatgatgagcaaatcttttcatatgcttagtggccatttaagttccccttagttcct
taagttcccttaagaattacctacttacgtctgtttttgttttgttttgtttcgttttgt
tttgttatggattagtcactttttcttgtggatttccaagagttattttcaccttagggt
taaggaacagtagtaaaagtgccacacaaagctaaccagtagtagtgaccgtgtcatcag
ccctctagtaactgaatataaaccgtggtatttcatgattggttattttcagcctctctg
tagagccagtgtttcctcatctatcggtggctgtggggagtagagttgacttgggaatct
cgttcctgccatgtggagacacgcgcgttatgtaccctgtggagtctgttgcctggcgag
gtgttctgggtccccgcctgtaatctgactctcactgtagccatccctgattgaggctgg
gtccccgcctgtaatcctgactctcactgcacccatccctgatcgaggctggactctttg
gtgtctttgtttacggcggcagatgggaaatgactacaaataatcagatgtcttgtcgtc
tgatcgtttaccggcatgctgttcatgccatgctgactgtgtttattgccctaatggggt
gattaaacattctttattaaaataaacaaagtcttaggactcgtgttctccctctttgga
gccagcgtcggctgcagcctcctcattttggctgttctggtgagtggtgctgtggacatg
agggagccctcccttcccacatgggtctgtgtgccatggacggtgatcatggtgtcctgc
agtgggtccagagtgatgggcccgggaagcccaggctgttgcctgtggagcggggactga
caggagccttggggcttagccgggccaggccaccagctggggaggggacagccaggacta
ttccgagaggtgcctttgcctccggaagaagagcgtggccatttcctgtggaggagttac
actggctgtggcatggcctgtgttctggggtcatccccaggccagtgacctcaggcccga
gtttcttccgtgtgggtttgcttatggcttgacgttgagtcacagatagcaaaatgtgat
accctgtgtgggctttttgaagactcactcctggaacctcattgacaggagagaaagaaa
aggcagggataggatcagagaacatgatggtgtgtagtttttcttaaaacatgtgattta
ggttagaaaccctgtatttaaattaccaatcagtaacagaatatgttggcattgaaaata
acatgagcattaaaaaaaatacttccttcactgagcaactgaaaccaggatttggcctca
gagagaaatgctttcatcacagacacataggggctgcagagttgctgcccgcctggacct
ggggggcgggggctgtggggaggggctggcggtgttgccctgagctgctggcccacatct
ttgtgtttaatggtggttgatggcttcactggcttagcatcctgaagacctgtcaggccc
ctctccacactgatgtcctcctcttgcctggggaggagcccctcagacagcctgagacac
ccaggggcagggcagccatccctgcacccctgccttgcggggggcctcccctcacatccc
cctcattcatgctgtgagcctgacaccaggggcgtcacacgttgtgagtggaagtgtggc
cctggtgggctccaaggacatgggcaaaacctcctcccctccctgtgattgccgtgagga
ggccgtgtaggttactttctacctgtacctcccaccttttcttacacttgaggacccctg
ccatggttataccctggagggtctgtgagccaccacttccccaggccaccctctgacaga
ggcctatgagcccttgatcctcctgtgtgtcttgctgtatgtgcctgatgccgggtaggc
tgggtcctaacacgtaaaactctccagtggggagcagagctgggggcccctagctatccc
ctgacccctacttcaccacagcatctgccaaggagttggccttgaggtggcacatgtgca
tgagcctggctccttccccaactctctgtgcatttgtagagggcagggtttactgttcct
gtctggagggccgagggagccacgtattccttgtgaggacattatcaggtgctgctcctg
cagtggcctctgttaacagaaggagggtgcagtgctggagcctcagaagaggctcgtgga
ggccgcagtgtgtctggttctgatttctaggggtttgtgaacatctgtttgtggtttgaa
ggctttttggctcaccaggtgggtcagatctccataaaagatgagcatctcgcaacgcgg
atgcactgtggtttggCTGTGTGCTAGGTGGACGTG
Primer
(+)cacctgggatcacctacctctg
(+)cacgtccacctagcacacag


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