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Mouse element [ mm2045 ]


Position: chr13:14,968,216-14,973,384 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: AW209491 - Gli3

Timepoints:
e11.5

Expression Pattern
forebrain (4 out of 4 embryos) 

Embryo 1


Embryo 2


Embryo 3


Embryo 4


Fasta sequence
CCATGTGTATGTGGGCTTTCtattacttatggggtttgtttgtttgtttgtttgtttgtt
tgttttttgaccagccttagtctgtggtgttctgataggatgcatgggattattttaatc
ttcttgtatttgttgatgcctgttttgtgaccaatcatatggtcagttttggtgaaggta
ccataagatactgagaagaaggcatattcttttgttttagaataaaatgttctatacata
atctgttaaatacatttggtcaataacttctgttagtttcactttgtctctgtttagttt
ctttttccctgatttattcattgctcagagtgggggactgaagtctcccactattattat
gtgtggtgctaatgtgtgttttgagctttagtaaagtttcttttatgaatttcagtgctc
ttgcatttggagcacagatgtacagagttgggagttcatcctggtagatttttcctttga
agagtatgaagtgtccttccttatcttttttgctaacttttggttgaaagtcaattttat
tcaatattagaatggctactccatcttgtttcttgagatcatttgcttgaaatatttttt
tccagctttttactctgaggtattgtctgtcgttgtcactgaggtgcatttcctgtatgc
agcaaaatgctgggttctgtttctgtgtccagtctgttagtctatgccattttattgggg
aattgagtccagtgatgttaagagattttaaggaatagtgattgttgcttcctgttagtt
ttcttgttagaggtggttttatgtgtgtgtggctatctttttttggagttgttgaaagat
tactttcttgctttttctagggtgtagtttccctccttgtgaatagtttttcatctatta
tcctttgtagccctggatttgtggaaagatgttgtgtaaattttgttttgttatggacta
tctcaatttctccatctatggtaattgagagttttgctggttataagtagactaggctgt
tcttttagggtctgtatgacatctgcccaggatcttctagttttcatagtctttcttgaa
aagtctggtgtaattgtcataggtttgcctttatgttacttgaccttttcccttactgct
tttaatattctttctttgttttatgcatttggtgttttgattattatgtgatgggaggaa
tttctttctggtccaatctatttgtggttctgtaggtttcttgtatgtttatggtcctct
ctttctttaggttagggaaattttcttctataattttattgaagatatttaataaccctt
tgttttgggaatttttgctcttttctatgtttattatccttagggtttttttttttcatt
atttcctggattttctggatgttttgggtgaggagctctttgcattttgcattttctttt
actgttgtgtcaatgttttctatggtatcttctatgcctgtgatacttttttctatctct
tgtattttgttgttaatgcttgcatctatgacttctgatccctttcctaggttttctagt
tccagggttgtctccctttgtgatctctttattgcttctatttccatttttatatcctaa
ttgttttgttcaatttcctcaccttttggttgcattttcctgtatttccttaaggaactt
aggtagttcctctttaaggccttctacctgtttacctctgtcctcttatatttctttaaa
ggagctattaatatccttaaattcctctatcaccatcatgcgatgtgatagaatcttgct
ttttttttggtgtgttgatggatccagtggttgctgtggtgggataactgggttctgatg
atgccaagtagccttcgtttctgttgcttatgttcttacgcttgcctctagcaatattgt
tgtccctggtattagctggttttgctgtctctgactggagtttgtctatcctgtgagctt
gtgagtctgtggtctaaagtgtgccagtactcttgggagacaagctctctctggtagtga
ttggggtgtggatagctgtaatcttaggtgtttcagcactcttgggagaccagctctctc
tgtggtcttagatgtgtaagtactcctgagagacctgctctttctcagtgagattggggt
gtagatagttgtggtacagggtcaactccagggtgcagatggaaaccagaagaatcctgt
ccctgcctgttctgcagttcctgtgtcttagtccaagaatttttatcatggcccttttca
acaaggttgaaaactgagctaaatgtttaaatgctgtagatagctctggtcttgtatttt
gatattaattttgctttctcgggaggggttgtagacaaggagtgaatcacatataaaggt
aaacattttccccaccttaactttcgaaataaaggctagagctggtgattggactttagg
agggaaagtggagctgaaaagtttgggggagaagggagagagaaggagagcagacaatgg
aggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaggaaggaaggaagg
aagatggagtagaagcacgtggcttggagaaaccagaagttataagggatgtcaaagatg
gaaaatagagtagtttagtggtagagctgcccaatctaggcatgtagcttgtattctaat
taattgagttgagattttttttgaccaggctttttggggttggagctttactgcaaaaga
taaaggcctgctttctttctttttttctttctctctttctttctttctttttttttcttt
ctttctttctttttttctttctttctttctttctttctttctttctttctttctttcttt
ctttctttctttctttctttctttctggcaaaagaatggctatccattccatccagcttt
cttcaaacatctaatgagaagtatattccaggtacagtatcaggcactggaaaatacatt
gttgtaagacactggggagttgagggatgaggataggaatgggaaaagactagaaacaga
gtcaagaatgggccaaggacaagatacacctgttttccagatgtaaacaatgagcaaatg
ttaagttaaaagtatgggcattgaaaaaagaagtgctgacattgggaaaagaaaaaaatg
ctctaaagtttcatcaccgtagaagagctctaacacattactgccagggtttcattcact
atattctttatgcctcatgttagatataggatcattctgttcttgagattggaaaattgc
tgactgattgctttcatgccagattctttttgctacatgcaaagtcttttcttgtaacta
aatccaggtttcctgttacagtttgttttatattcaggtagcatgtggccatctggaatg
agaatgttgagttgaggcaaatttcccacccagatagtatgtcttcatgcttcttatgta
tcgtattgaaggagaggctagaaagttgctgcagctaattcggcaattttgttttgcatg
gaaaagataattagcttcttgagaaagctcttggtactgtttcctgagtgtacaaaagaa
aactaaggagccttctaagtactacagggaggacacttagcaagtcagaaatgtagctat
aatctgaagagcatggaagttggaagatcactggttgaattgggaatgaaactattaatt
acataagaaaggagatcagtgagtgaactgagaagtaataatagactgaattttgaagag
aatcattggctggattgggacaagaatgtctgaactgagaagaacaccactggagaggaa
gttactgagtgaaatggggaggagttcactgactgattgagttgggaaggagatcactga
ctgaaatggggagtacaatgctgaatgaagcaggaggactatgctgactgtattatgaag
gagaaaattgaaggaattgaaacagacaagacagaattaaccagaagaccacctgctgaa
ttggggaaggaaatcactggctgaggtggtaggaaaaacaatgcttaattggaaaggaga
tttctcactggatttccaaggagtcattcccaggagtaagatcagtgatggctgaagtgg
gacagtgattatttcctgaattaaaaaagtcacgtattggattaggaaggaaataactga
atgcactgggaaggagataatgaatgaaatgacacagagatcactgatggaaatgaggaa
aaaattgttgaattcagaagatctctgacaaacttggagatcagtgactgaatttggaag
gatgtcactcagtgacctgggaaaatgatcactgaaagaattgggaggattactggctga
accagaaagtaaatagctcactgaaagataatacagactaaataggtaagcaaatatcta
aattggaaagatcactcacagaataagggagaaaaatccctccttgaactgaagagatca
ttgacataaatacaatgcagcagtaggggaagcttatttgtgcaggagatcattcactaa
atttcagaggggattagttgctgaactgggaaagagattagtcaagtgggacagtgaaca
ttccatgaattaagaagaccactcacagatttggaaagaaagtcattcagtgaattggca
ataatcctggctgaattgataaagacattaataactgaattgagaaagacaacaatgatg
gaattggaaaaaaaatcactccctgaagtggaaggagatcagtaattgatatgagaatat
aatcactccctgaattaggaaggaggtttctcactgagttgagaagggaattactcaaca
aaatgagaaggagatctatgattgacattgaaatcattgaagtgtgaaggacatcaatca
ttgaattgggaagatttctggctgaattcagatgtaattattgattttattgaggatatc
attgttttagttttcttttttccttttcttatattggattttaataaaaatgttattaca
tatattactcatttacatttccgatgctatcccaaaaggcccccataccctccctctact
cccctacccacccactcccacatcttggccctggcgttcccctgtactgAGGCATAAAAG
TTTGCAAGA
Primer
(+)CCATGTGTATGTGGGCTTTC
(+)TCTTGCAAACTTTTATGCCT


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