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Human element [ hs2045 ]


Position: chr20:48,291,612-48,294,178 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: B4GALT5(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGAGTGGAGGGGATAAGAGCaggggagggggaccaaacccaactttgcctcccttcccct
tccacgagcagcctggtggctggcttgttccgtgtgttcagtaacatttgcaaggaccaa
aaaaatcactaattcctaagattgctgttactctcaaacaaaagtcaattcccaagccca
cacaccccacagtcaagctgagagttaaaactcagaaaactcaaaggccttaggatactg
accctatgctggcaaccacatagctcagaaatgcaacaaatattaaattatggtgtcctg
taatggatttacactttacttttaaatattaacaagacggccacagggagtaagtttatc
aagggataagaatcctaacagtacctcctagttcactcagaggccaattaacatttccca
ccacgcccaacaacaaggctcctgggggtgttcaaagttgcttatgaccctgtggagcta
tcagcaggtacctctgccccagaacctattatgagcaatgcactaggggctcggtgcaca
aggaaacacctgaactacaactacccaagcaaatatcatatctttgtaggttgtcgggtt
tcttcagctgtctgaagatacaaaacctcatgtgactgtttgatttttagtctcttctca
ccttggtcttcctttctcacagttatttttaaaatcagcaactggctaatatttgaaaac
tgtcagtagccaactgtccgtttcacaattagatcactgttcaaaaggagcagaattttc
aactctagactttagttcaacaagctagcaaatcattacaggaatgagtgacttcatctt
tacagctgggtcgctgcactatgaggctacactaaaatatacctaattgttgaattccaa
catgtctgtaggccctccccgcatcttcaaggttagagtttttattattgcatcctcccc
caacccaacccccccagacaaagcttggcattttcggaatccctactcataaagtgactc
agtccaccgatgggccaactgacaaatccttaagggattaagatattaccaggtaaaaag
tgacttttaaaaatgtacataatacatatatatgtagagagagagagtgtgtgtgtgtgt
gttacaggaaagctattaactatactatgaataaaacaaaatttcactgaaaataaaagt
gatcaggtagcactgactacaaccttctaaattccccctaaatgaatccacagaaagact
ttcttgaagggtcttttgctaatttgcggttagaacacaacacactcaagaaaatgatgc
tcacagcaggacactaatactaagtaatttctgagattatgtctgcatttgtgctaaata
atttatgctaggagcagaaataaaagcagagatgaagttaagctattgattgaagactgt
gctaaccccattaaaaataaagagaggtatgaatgtgtgccttcacaactcagctcagga
tatacttgccaactgagctcttccttccgtaagaaggcccattgctcttggctactgcgc
aggggctatgaaggccccatggttctaggactagagcagatgcgtacaaactccctaaag
tcacaggaaggaaggggaggcacaactggagagaagttggtgaactgcctctctggccca
taggggcatgagggcggggggcacagaataaaaccataaagcaataattttcactattta
aaagaacaagtctaaatggcacacatcctctgtgtctaagatgactagcactgctgtttt
ttgatgagtcatcaagggcagtcatgctgaaaagcagggatacttctgtattccacctat
gtaatcattccaaaattatgggattggaacattacaatacctatgatgtatgtccttata
tttgtatgtgtttgtgtgcttacccttaagtggtgttttttgttttgttttgtttttgct
gacttctttgttctagggggtatttctgcagccttctcagaaaaacctcagggtattaga
gaaggtacaacttgctaatggcatctggtgagcatgggctggaaggggaaccaccgggaa
acacagttgtcaataaccacacccgctatggtgcaaacatgacccacatacaaactgaag
tacaagtacaacccctcccaaaagtctagccctaagataatagcacagaaactaagccta
acaaggtgcttggaacctcttcctacctgcaccaaccaccctctgcacaccatccccagc
aagaccccctgcctccaactcccctaaagcagcatttccaggatagcactattctttaat
ccactgacaactttggcactggctaaggcttactatttttatcccctttcacaccattct
ctgagcagaaatgctaggtgcaaacatttgttggtaattatgttaaagtaagtcttctta
agaacaaatggtaaaatgaatacatgaaaactttgcaatctatttttgaagaattgtctg
caaaaagagtggaaattgagttTTTCTTACGCAGCTGAAAGGAtaaa
Primer
(+)ggagtggaggggataagagc
(+)cacctcctttcagctgcgtaagaaa


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