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Human element [ hs2031 ]


Position: chr3:124,304,700-124,307,917 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: KALRN - UMPS

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GTCTCCCATCCCATCTGCTAtgcaaaatcctaatggaactttctggctgagttactggtg
aataaacttcatccaagccacctttcagcatcctctgtgccacaaacacacaacatagcc
ctgagaaattttctatcctgagcagatataaggttaccaaaactaattaaatctgaatga
cttttcctgcgcgtcattaaggtcataatcttagcatcagatggtctcaatctctgtatt
taattagagcagcctggaaccgtgtggttttgagctctagaaaccagaattcagatgaag
aaggaatgtgaggggccagggaccctctaagtctgattcagaaacattcaaaaccaaggc
tgggaattgagggaaagggggaataaagcgcggaggaagcaggaaatggccaaggggaat
ctgagtgggtgggttcgctcgaaggctgccctgctttccccgcaaagagtttctctgcag
gatttcttgggagtccgtttcctgtcagacagaatgtgggggctggggtggtgcttatct
gaagtccccacagctgcctccttgagtccagatgtgtgacagccctggctgcccttcagg
gtaactctctgggcgtcttgctggcccttgctttgttgaggaattgcccgactttcactc
tcgctgtgatgcaggggagggctggggagctggctccagggcctggtaagtgcctcctgc
ctagggcctgtgaaggcagtggctgctggctccgtggctaggagaggaggcgtgcgagtg
gctatcgtaggagcgggagctgaaaaggctagcgaccctcagatgaagactgagggagtc
agaggtccaagcaatgagaccagtttaaaagggaaaagaagggtggcaaggtgggtgccc
ggggccttctcctgctttactcctcactcccctagatctgaaatgtgtgaagatgaaaaa
cgggctcatcagaggacgatggtgggggaggtgagttagccactctccaaagaaaactcc
tgcctgtggctaggctgggggtcgtgtctgaggtgttgggcatgccctgaggctccctca
ggctcactctaaccgaaaacagtctccactcagcctgtaggcatcaatttgaaaacagat
tgaaaagataaggtctgtattgagcctgagtgcatggcccagagtccgtggactctttgg
gaagaggcttgcccaattgcaacacccaaaagggctgaggggagagtcttgaggctgtct
ctcaagtggagggtgtgcactgcaggggactgactgcctcccttttcagttgaaccagtt
cctctggtcttagggaaaatacaatggaaaggcaacctccacactccaccttgtagataa
aggcggccggttgtttggtctctatcccttctctctcagggagaacttggctgtctcctg
cggcttgagtagcttgactctgaagcaatgactcagagcccactgctgtggttcccaagg
caaggggacttgaccatctgacttccagtcatgcaggatttaaaggatacctccttctaa
agtctgaggaaaaggacaaaagtaaaagaaccaagaggaagtggaatgttttggctattt
ttgacttgaagctaagtgagctacattgggatttctctggtgaattctgagtggttgtaa
ttgtcatcactagggtcagagtcaaggatttagataaagtacctgtgtggtctttaaata
tcacatttgaggaaaatatggatgaatttcactgaacttatcttttgatttggaagagta
tggaaagcgactatcttgtatttttccctccacccccaccctccactttttttttttttt
tttttttttttgatacagggtctcactctgttgcccaggctggagtgtagtggtttgatc
atggttcaccacaaccaggatctcctgggctcccacctcagcctcccaagtggctgggac
cataggtgcatgccactaccccaggctaatatttttattttttgtagagacaaggtctca
ctatgttgccaggctggtctcaaacttctgggctcaagtgatcctactgcctcagcctcc
caaaatgctgggattacaggcgtgaaccactgcacttagcctttttggttctattgagta
tgagtacagaaagcaggtttgatgaaagatgatttttcttccctatcttgaaactggtgt
tgaaaggcaggaaaactgaaaaccaaggatagaaaggaaatagatatcgggtaagaagga
agaaagaaggcaaatgcatttataactgcctttttgaaggtgaaaaacaaccaaaagtga
gataatggcatgcatgtgtctaaggggtgataaatcattgatgtcacactctgtggggag
ttagttttgggatagctttgactagctagactgtccttcaagcctgaaaaagtgggtcag
ttcagaaaagatttcaaatcacctggaaattgctaagttatgtattgcactggaatttgt
gatcaaggagcccagagatttttctgacctttctaggtagaagccagttttagagactta
attttgttttgagatggagtctcgctctgtcgcccaggctggagtgcagtgggacaatct
tggctcactgcaacctctgcctcccaggttcaagcaattctcatgcgtcagcctcctgaa
tagctgggactacaggcgtgcaccaccatgcccggctaattttttgtattttcagtagag
acggggtttcaccattttgtctaggctggtcttgaactcctgacctcaagtgatccactc
ccctcggcctcccaaagtactgggattacaggtgtgagtcaccgtgcccaaccaagagac
ttaagtttctagtcaactttcattagctttaggtatgtggacaaaagtccccttttgaaa
gcttttcctgattaccatcctccacagtgtgcatgggatttatttatacttgtttattgc
tgtatcattgtccttgcatcccaagcccacgtgccattgtgtcttcacatttagactgag
atagtccagccacctgaacatctcagaggtaaagagaggaaggaggtgggacttacccaa
actgaatcacttcactggggaggtgcagggattggtttctatgattctttctttacttgg
gtagtccttcctgcTTGTCTCTGATGTCATGGGCttTG
Primer
(+)gtctcccatcccatctgcta
(+)caccgcccatgacatcagagacaa


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