Human element [ hs2031 ]Position: chr3:124,304,700-124,307,917 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: KALRN - UMPS Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence GTCTCCCATCCCATCTGCTAtgcaaaatcctaatggaactttctggctgagttactggtg aataaacttcatccaagccacctttcagcatcctctgtgccacaaacacacaacatagcc ctgagaaattttctatcctgagcagatataaggttaccaaaactaattaaatctgaatga cttttcctgcgcgtcattaaggtcataatcttagcatcagatggtctcaatctctgtatt taattagagcagcctggaaccgtgtggttttgagctctagaaaccagaattcagatgaag aaggaatgtgaggggccagggaccctctaagtctgattcagaaacattcaaaaccaaggc tgggaattgagggaaagggggaataaagcgcggaggaagcaggaaatggccaaggggaat ctgagtgggtgggttcgctcgaaggctgccctgctttccccgcaaagagtttctctgcag gatttcttgggagtccgtttcctgtcagacagaatgtgggggctggggtggtgcttatct gaagtccccacagctgcctccttgagtccagatgtgtgacagccctggctgcccttcagg gtaactctctgggcgtcttgctggcccttgctttgttgaggaattgcccgactttcactc tcgctgtgatgcaggggagggctggggagctggctccagggcctggtaagtgcctcctgc ctagggcctgtgaaggcagtggctgctggctccgtggctaggagaggaggcgtgcgagtg gctatcgtaggagcgggagctgaaaaggctagcgaccctcagatgaagactgagggagtc agaggtccaagcaatgagaccagtttaaaagggaaaagaagggtggcaaggtgggtgccc ggggccttctcctgctttactcctcactcccctagatctgaaatgtgtgaagatgaaaaa cgggctcatcagaggacgatggtgggggaggtgagttagccactctccaaagaaaactcc tgcctgtggctaggctgggggtcgtgtctgaggtgttgggcatgccctgaggctccctca ggctcactctaaccgaaaacagtctccactcagcctgtaggcatcaatttgaaaacagat tgaaaagataaggtctgtattgagcctgagtgcatggcccagagtccgtggactctttgg gaagaggcttgcccaattgcaacacccaaaagggctgaggggagagtcttgaggctgtct ctcaagtggagggtgtgcactgcaggggactgactgcctcccttttcagttgaaccagtt cctctggtcttagggaaaatacaatggaaaggcaacctccacactccaccttgtagataa aggcggccggttgtttggtctctatcccttctctctcagggagaacttggctgtctcctg cggcttgagtagcttgactctgaagcaatgactcagagcccactgctgtggttcccaagg caaggggacttgaccatctgacttccagtcatgcaggatttaaaggatacctccttctaa agtctgaggaaaaggacaaaagtaaaagaaccaagaggaagtggaatgttttggctattt ttgacttgaagctaagtgagctacattgggatttctctggtgaattctgagtggttgtaa ttgtcatcactagggtcagagtcaaggatttagataaagtacctgtgtggtctttaaata tcacatttgaggaaaatatggatgaatttcactgaacttatcttttgatttggaagagta tggaaagcgactatcttgtatttttccctccacccccaccctccactttttttttttttt tttttttttttgatacagggtctcactctgttgcccaggctggagtgtagtggtttgatc atggttcaccacaaccaggatctcctgggctcccacctcagcctcccaagtggctgggac cataggtgcatgccactaccccaggctaatatttttattttttgtagagacaaggtctca ctatgttgccaggctggtctcaaacttctgggctcaagtgatcctactgcctcagcctcc caaaatgctgggattacaggcgtgaaccactgcacttagcctttttggttctattgagta tgagtacagaaagcaggtttgatgaaagatgatttttcttccctatcttgaaactggtgt tgaaaggcaggaaaactgaaaaccaaggatagaaaggaaatagatatcgggtaagaagga agaaagaaggcaaatgcatttataactgcctttttgaaggtgaaaaacaaccaaaagtga gataatggcatgcatgtgtctaaggggtgataaatcattgatgtcacactctgtggggag ttagttttgggatagctttgactagctagactgtccttcaagcctgaaaaagtgggtcag ttcagaaaagatttcaaatcacctggaaattgctaagttatgtattgcactggaatttgt gatcaaggagcccagagatttttctgacctttctaggtagaagccagttttagagactta attttgttttgagatggagtctcgctctgtcgcccaggctggagtgcagtgggacaatct tggctcactgcaacctctgcctcccaggttcaagcaattctcatgcgtcagcctcctgaa tagctgggactacaggcgtgcaccaccatgcccggctaattttttgtattttcagtagag acggggtttcaccattttgtctaggctggtcttgaactcctgacctcaagtgatccactc ccctcggcctcccaaagtactgggattacaggtgtgagtcaccgtgcccaaccaagagac ttaagtttctagtcaactttcattagctttaggtatgtggacaaaagtccccttttgaaa gcttttcctgattaccatcctccacagtgtgcatgggatttatttatacttgtttattgc tgtatcattgtccttgcatcccaagcccacgtgccattgtgtcttcacatttagactgag atagtccagccacctgaacatctcagaggtaaagagaggaaggaggtgggacttacccaa actgaatcacttcactggggaggtgcagggattggtttctatgattctttctttacttgg gtagtccttcctgcTTGTCTCTGATGTCATGGGCttTGPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.