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Human element [ hs203 ]


Position: chr1:164,637,575-164,639,037 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: PBX1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
CggtGGTTCGACTTTGAGGGTCAGactttactcctgtagcaaaagttggacaaatgtata
caaattctctcacctctcacacgccaacatcttcctccacccaccccacctccaccatga
cttaggatcacctgagagagaaatacaaggtctcccagccagggccctgctgggctgtct
cctgaggtgatctttagataggtgtcgataacagggagcctccgagccctgccaaaatca
cttggccacagccccaagataatatttgaagttcttgtgctcaagagtgtcaaagtgtaa
catactcttcccctttcgccttaccttccccaggcgcagccaacacttgacatcttttta
tcagatgagcttggcactgccaggaccggctcctcgcgccaatgtggcagcagccacagc
ccctcagcttgttagactgaaagaatgtgccgttttaattaatgatatgtaaatatcctt
gaatgggccgcatttgcatattaagagagatttgcggaatctgcggagtaatatatttta
attaaggattaattaaaaataatgggaatttcatttcgcctggcagaatccgtttagatt
ttagcacacgtctgcttgggagtctggtaggaagactgtgtgttacgattcccgcagatg
agagaggcactcctgtgtttatcatcttggagccccactctggggagcaaagggaatata
aagggggtaacattttcctcttacctcccccatcacccacccctcttcttccctcctctt
tgtgattttagggctgttttggtattctttatggtaaagtaagtaaatggctctgagaca
cggaacactagttgtgttggcaattatgttaatgggatgctattaggctatgattctata
tgagcaattggggagaagaaatgccttactgagagagaatgatacaacagacgtctgtct
tattgatatagctccagtggtgctttctgcataattacactcgtccactttcttgaggtt
ggggagaaaccgctgcactgggaattaagagcaagggattgggataaggggcgccctctc
ccaaatccacagaggacatggggtgggggcacattcttctagcagatgtgggtgttgcag
gtgagcaaaacttgtttcacagaaattttattctcttcttttccttctacttccaggaag
tagtcttaagtatgggctgggttctagctccaatagtcctctccagaagtagaatttttt
agaatgtacacactgcctctctgaccttctgtctctgggcacaccctacttccctttcct
gggttcatgcaacaaatcctcatactcctagggagttcactattctgttcttagccctaa
acacatgttcacagccttctaatatttcctgctacccaattggcctttcctttgtgtata
tccATGTTGGGCATTGTCACAGA
Primer
(+)CACCGGTTCGACTTTGAGGGTCAG
(+)TCTGTGACAATGCCCAACAT


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.