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Mouse element [ mm2022 ]


Position: chr13:15,693,927-15,698,742 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: Gli3(intragenic)

Timepoints:
e11.5

Expression Pattern
eye (5 out of 7 embryos) 
forebrain (6 out of 7 embryos) 
hindbrain (rhombencephalon) (5 out of 7 embryos) 
limb (6 out of 7 embryos) 
midbrain (mesencephalon) (7 out of 7 embryos) 
neural tube (6 out of 7 embryos) 
nose (6 out of 7 embryos) 
tail (6 out of 7 embryos) 

Embryo 1

Embryo 2

Embryo 3

Embryo 4

Embryo 5

Fasta sequence
TGTTTAGGGTTCCTGCATCTttagtcattctccagatgcacagggatggaagaagttgtt
cataagcctagggctctgtctccctctgtaaaaggcttccaggaccagggcagggcactg
agcatcctatgggattcagtaggttttgcctgttttctagcactgcatccgacctcagtg
gtctgttggctgttctgttctaggggctctggaggggaaaatgcagactcagccctgctc
acaagcttcccggggtgtttcagtgcatcccacataggagccttcccgtcctgtttagat
cctgtgaattcattgcagggtctgtgctcttgtctgttggaaaaaatatcgtattatttt
cagggggcttttgtttcattattttaagtagggtccaacaagaggattatgtctcacttt
tctgtgttcgtagttgagttatatcaacttgcagttacagaataaaggtaggtgtgtgtg
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgagtgtgtgtacactcacaccca
cacacccactcttgggctcagctttctattctcttttggtgtggataatcctcaagggcc
cttggcccttagggcagataatctcttcagggttatctgttaattaccgctgaatgtgtg
aaatatttgtgaaaaggcttttcaagtgagctccatgctctgctgctgctgctgctgctg
ctgctgctgagctcttacactggcttcagaggctgaggtttccctctcagcttggttccc
ttcgagagctgtttgcttttctaatgaagtgagctgtttgtttgactctgtggtggacgg
tatttaactagggactaaagtaaacctaggggagattcaaataagccatgcatatctgct
ttgtgaagggaaggcaaagagtttggcctccctcacctccaggaagagtcgttaagaaac
tgtttaaataataaactgagcagagcaagtagagattgcctctgcttgtcctagggcttt
tgtgttagcccagctggctggcctgggaatcacttcagtggccacaaggggaggagagag
ctgctcacttcctgcagttagtaattgttgtttatttatgtgtagagattgaaacacacc
ctctagtcctcaggatggcaagtgaatggcaaggcaatattgtcatcaatagccaatgtc
ctacttgcatcctgactgttgtcctggggtcttcattgtgtcctggaggccaagctcatg
gttttagaacaagttagatccctgttgcgttgcctgaggtatctgcatgataggacaaga
gaatgcatgattgaagtgtaacactggtggaccagtggcttgtttagatgaggtaggtag
ctgctgggtctctatagagggctttgagaggagctagctggcaaggttactcacccagtc
aagtagaaaatgttgtgccctcagaaaccagagacctctgagggctccctgagagcaggc
ccagggtcacttaactcccaaggaagaagagtccccagaagctcccagctaaatagtaag
gtttgttgacacccccagagttttcactcccccagccctaaaagcagaacaatagtcctt
tgaatttcttttggtctgtatgactatttcaacttgtgttgcctccaggaaacagggaga
tgaaaggaaaatgaagaccagctatccccagtagacatttctggtttgggagcccaggcg
agatgccatggtccttaccatggagctggtgcactaagagttggaagattgaaaataacg
tagaatatattcagcattccgtatggaattcagctgaggatcaagatgggaagccacatg
gaatagtgatgacatctaaccaaggagggtctgtagagaacttgagggagcaaatcttag
aatcgctggatcagacaggcatgcagaaccttatgggcttggtatctatatactcagata
agttttgaacagctatgggccagacatgggtctggagaagttgctcttatgtagaaagaa
ttttagaatcccttagatgataacatctgctgcaagcccacatggccaacatctttgagg
acatctgcagaatatgtgactagaggctgattcagaattgcggcggaaaggaaattagga
cgggttttcctgcttgcattctcaggagccaagcacgcgagagggattcctttcccccag
cactgggggattctttcctttctctcatgtccttgtgcgtccttgaaaagcagcctcagc
tgtactttataattttacagtcatggtgagagaagctcctaaaataaactcattgcttaa
aagctttatgtgttcctgctagacaatgagagttaagagtttaaaagacaagaaagtggg
gtcttttttaatgccctcagtatgcaataaacatgctggaatttcagtggaatccaaagg
ctcatgatgctagcatgaagagcaagcctttgatgctattgacagaaagaggggagggac
aatagggcccctctcatttttttttcaggagcctctaaacttttgatctctaaccttttg
tgtcaaggaattccttacagatgggtattagcagcctggtcaagtatcctgaatgcacca
gagcattaacatcttcttggtggcaaaggagtcttgaaaattttttactgcccactgtgg
acaataaatatcagttagtaattatcattatatcctaggcttagctaggctgtcaaggct
agaatgcctcaattaagagtctgaactgatacaggcagaatattttatacactacatgtt
aggcaaagagagggtgatgggtccatccatggtctgtggaacatagttgtcccactaccc
acggaggctgcattacaagactccgtgtggaaggctatggtaaagtgtactttataaatt
aattaggtgcagtgattgataaacaacaactaataataaaatctaacagtcgcaaaaata
cattacaaaaagacatataagtgaaatctttgccaaaatatcttactatatagtgtaata
tgtttctaggtatctaaagagtatataatatgggagtcctatatagcttagataagaaat
gatgaaaacaggggtagagagatggctcagtggttaagagcactgacttttcttccagag
gacttaggttcagtttccagcacccacatggcagctcacattggtctataactccagttc
caggagaaacaacagatgtacatataggcaaaacaccattgcacaaaagtaaaaataaaa
aaatcatcttaaaaagtgaatttgaggctagcctggtctacagagtgagttccaagacag
cttaggctacacacacacacaaagaatgattgaaaaaatgaaactttgacagtgttaagt
agattgtgtaagagcattggccttggagtcatgatactcagattctatattcttccccca
tgtaccactgggcatagaccttacctgcttattccatctatttgtgtaaaacttactttt
cagggtcaggccatatgaagaaataaaaggctgtctaaaaggtcttcttagtgcttcaaa
cacataaacatattctatctatttctatctattctttctattttcattatcattttgatt
attgctgtttttgagggaaacattggaagaactttagctcttcattgacaggaatgataa
atgggataacggtggaaattaaacagagaggagaataacccattttttaaaaaacgtgtc
taattttgaacagaaacaatgcatatgtcactcatttcttttaaaattccctctaattct
ccacccctagctttggaaactaatttagttctttctgcatgctaagcatgttctctacac
tgagttatatagttgccaaccagtatattcaagatgttggtagtattccattgccttcca
caatgcatggctctccggctaataaacattattctctttgtgaggtctatgggggccagt
gtcaacagttagagccttgtgcaagccctttccaggaaagcatggctgattgctcctcag
gactcctgcttcagatgtgatggagagggaagctgaggacttaggactgtgcctgcactt
ctttctgctgacaggcttttctcggctgtactctggaagtcggtggaagcactgtcttgt
ttgcttcacaggactttgtgggacttaggatagatcagaacagatcctagaatttccttt
catcttcattctaagaaatacagacagatcagacgtggggaccataaaatgcttaggaaa
tgcagctttcaaagtggctacagagatccttgtttgggtatgaaaactactgaaagttgt
ttgaagtcttttctgattggttctttcagacagaatgcagctcctagacctaacctttgc
tgatctttagtgtcctaactaaggcaagttctgaatacattaactccaaggcctctgctt
gtggaactaaggttgctggatgattataaacatatcccagcctcttttataaatcattag
cactaaggatccaagtacatggttttgcagctatgggtttggcttttgaattgtgctatt
aaaaagtactgctcttttataaaagtactttttgtcactaggaactaacttatcttttag
cttttaagtttatatattggcgatgaacttttcaacaaatatgtcaacagcatatttcag
agtaatagattgttatgcttttatgtgattttcttgggtgaatttgaagattagatACAG
TTGCCGTGTGTGTACC
Primer
(+)TGTTTAGGGTTCCTGCATCT
(+)GGTACACACACGGCAACTGT


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