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Human element [ hs2021 ]


Position: chr4:109,893,210-109,895,294 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: COL25A1(intragenic)

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
GGACACTTGGGGAGTCAAAGagttaaaacttccaaatattcaagaaaatgatataggtct
catgatggaaattcacctgacaaagagctgacatgatggagtttggagttcacattgtta
tttatgggaagaaataaactattggaaacaaatggtaaaaagcgtaattcaaaatctgca
acaggatgaaaatggacagggtattggaatacaaactctacatttaaaaaaaagagagcc
tttggtcatcatcagcaagaataccgtgcctaaatagagaatgtgggtaaaattaatttt
cattaaaattggaaacttttccagttcttgcttttgatgttttttgaaatatagaacctt
catcttactatcttgatatgatcaatttcctaatatgtagctaatactatcttactagat
agtaatgtttacaaaattctaagagcactgaatgagacctgcttggaatctgagaaaaga
caggcaagtcagtgggttctcattctctttcacctctaccttccaggacatttagattcg
tacccatgaagattcatcctgtattaggaattcaacccaaattccttcaatacaaagcaa
aatacagaggaaaatgagatcactttttgccactttccacctgaaatgctaaatgggctc
tgaattgagtgaaacttggccccactcagtgtgaaaactggctgaaatctgcatgaaagg
cagtctgggtttgtcgaagtagttcatgaactttggccaaactttcaaggaacctggtcc
aagtcttagtttgtaatgcaacatgaaaccaggtgaatttcagatggtttcaggtttcat
cctgaaaatttggcctagctttataatcaatcatcactctttttaacgatgaaagccaac
acacctttttgaaaatgaggactgcatgcatactgatgacagctaagctgtgaaccaccc
ttcacttcctttgccaaaagaagatttctcagaatggaaacagtttccctcttacctgga
aaggggaagttgagtgattttgatattgcgtgtagaaagaaatgatactcgatatgagga
gacatgtcatgtgaaataatcaccacatacagagcaaatggctgtattctaatcacttaa
ggttatgagagtcttattttattcacatccatgacagtggataacgtggtgtttaatctc
ctaaaatgagcatttggcttgaagctagtcatcagccagagtaactgccacgagaaacaa
aatgctgtgaaacataatcagtatttctatatgaagaagtgactgaagaacaaaagggaa
agtataataaatcatagcataacttttgtctagtttaagaaacatgaggagataatacaa
ctacaaacctttcaagtttgcatcaactgcatcttttgcaaaaatatctctatgcagtat
aaatgcatttaataagtaactaagcacagtgaattttacagaaagacctacatagtttct
tttttcaacctgaaagttttaaatgagcctttccactgtaaaaaattactctattcaacc
aaatacttgcttttgtgcatagtgacatgagaaaattgagaggtatgtcgaacggagcca
ctacatcattgaaacagtatgtctgaacatttgggtaataaggcacagatgtgaagtaga
ggacttggcactaccaaggtaacaacaaagcattcaccattgtgttataatggttaaaag
ggccacatctgagaagcttaaaagaatgctccctcctacctgcaatgctaaattgtatta
caccttttatctgcttaaaaatctataaaaactagaaattcaaataagtatcatgcaaac
ttatggcaaagaacaaatatgtaaaatgcactgataattttatctgtaaaaaaacattta
tgcaatagcacgtaaggtttaactgcagcaaaaggccaaattcaatagaaatccatatgg
cctctatgttgtgaaacaattcatgcaaatctgaaggactcaatagtcacgggaaaggtg
gctgctattgattcttagaaGTGATTCTGGCCCTTACTCAAtaTG
Primer
(+)ggacacttggggagtcaaag
(+)caccttgagtaagggccagaatcac


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