Vista Enhancer Logo
Enhancer Browser banner
Vista Logo

Human element [ hs202 ]


Position: chr1:164,023,244-164,024,214 (UCSC browser)
Source: Lawrence Berkeley National Laboratory

Flanking genes: LOC100422212 - PBX1

Timepoints:
e11.5

This sequence did not show observable enhancer activities at E11.5
We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution.


Fasta sequence
aAgCTTGGTAGAAGCCCAACATCCgctcatagatactagtaatgttgtcacatttttaag
taatagaagaatttccaattagctaaggaagtagaaaaagagtggaaatttacaatgaaa
ggaggtcagtataacattgaaggtagtgctgaaaggagaggagtgagttttctgaacatt
ttggatcccagaaaagatgctgtaacagtttccatgaccaaatatataaatggaataaat
ttatcaatctgagtatcaagaattcaaaaaggaaggcactcaaggctctcagggaccaag
gcctgtctattgtgactgctaatccaagtgagtttgggttaaaaggggttaacagccctc
tgctgtaacacatgattggtctttatgaggttgaagctcttgtctgtttgaggcctacag
atgatgctaaagagccaataatgacagcaattcaaagcaatctaattatgcaaacgggag
gctaaacaatttcatcatccttaaattagattgtcctaatgagataaagacaccaattaa
tcctgaattaatttcaatagcctatttcaggcaaacactttaatatgcaaatgtaaatga
gaaacaaagcctactgtagaatgccagagttcagaacctctctcttcgcagctgcagcgg
gtgtaaatagtgcctaatgagtttgcatggaaagacacaaccagccgaaaattttagact
tcataaagcacagccggtgcctcaggtatactggatgtggtctggagccagacatgaaag
gaggggggattttgcaggagaatgttatggtaaggtaggtgcactttgctggagtcatac
ataccattctctaagcaaaaacaaggcagtccatccagctcagcgctcaactgtgcgatg
tgtgcatgtgtgtgtttgcatgcgtgtaattgtgtgtgtatatatgtgtggTGAAGGGGA
GATGGAGAAGA
Primer
(+)CACCTTGGTAGAAGCCCAACATCC
(+)TCTTCTCCATCTCCCCTTCA


For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.