Mouse element [ mm2017 ]Position: chr13:15,528,173-15,533,102 (UCSC browser) Source: Lawrence Berkeley National Laboratory Flanking genes: AW209491 - Gli3 Timepoints: e11.5 This sequence did not show observable enhancer activities at E11.5 We define a negative enhancer at this developmental stage when at least 3 transgenics were obtained and yet no reproducible pattern of expression was observed. This does not mean that this sequence is not an enhancer at another time point or a weak enhancer at this time point but below the detectable range at our level of resolution. Fasta sequence ATTTGGCAGATAAGGCCACTaaagtggtggctgctgccctatcatccccggtagaggctg caagaaattttcataacaattttcatgtgacggctgaaacattacgcagtcgtttctcct tgacaagaaaagaagcccgtgacattgttactcaatgtcaaagctgctgtgagttcttgc cagttcctcatgtgggaattaacccacgcggtattcgacctctacaggtctggcaaatgg atgttacacatgtttcttcctttggaaaacttcaatatctccatgtgtccattgacacat gttctggcatcatgtttgcttctccgttaaccggagaaaaagcctcacatgtgattcaac attgccttgaggcatggagtgcttgggggaaacccagactccttaagactgataatggac cagcttatacgtctcaaaaattccaacagttctgccgtcagatggacgtgacccacctga ctggacttccatacaaccctcaaggacagggtattgttgagcgtgcgcatcgcaccctca aaacctatcttataaaacagaagaggggaacttttgaggagactgtaccccgagcaccaa gagtgtctgtgtctttggcactctttacactcaattttttaaatattgatgctcatggcc atactgcggctgaacgtcattgtacagagccagataggcccaatgagatggttaaatgga aaaatgtccttgataataaatggtatggcccggatcctattttgataagatccaggggag ctatctgtgttttcccacagaatgaagacaacccattttggataccagaaagactcaccc gaaaaatccagactgaccaagggaatactgatgtccctcgtcttggtgatgtccagggcg tcaataataaagagagagcagcgttgggggataatgtcgacatttccactcccaatgacg gtgatgtataatgctcaagtattctcttgcttttttaccactaactaggaactgggttta gccttaattcagacagccttggctctgtctggacaggtccagacgactgacaccattaac actttgtcagcctcagtgactacagtcatagatgaacaggcctcagctaatgtcaagata cagagaggtctcatgctggttaatcaactcatagatcttgtccagatacaactagatgta ttatgacaaataactcagcagggttgtgaacaaaagtttccgggattgtgtgttatttcc attcagtatgttaaatttactagggcagctaaattgtcaaaaagtctttttcagtatatg ttacagaattggatggctgaatttgaacagatccttcgggaattgagacttcaggtcaac tccacgcgcttggacctgtcgctgaccaaaggattacccaattggatctcctcagcattt tctttctttaaaaaatgggtgggattaatattatttggagatacactttgctgtggatta gtgttgcttctttgattggtctgtaagcttaaggcccaaactaggagagacaaggtggtt attgcccaggcgcttgcaggactagaacatggagcttcccctgatatatctatgcttagg caataggtcgctggccactcagctcttatatcccatgaggctagtctcattgcacgggat agagtgagtgtgcttcagcagcccgagagagttgcacggctaagcactgcaatggaaagg ctctgcggcatatatgagcctattctagggagacatgtcatctttcatgaaggttcagtg tcctagttcccttcccccaggcaaaacgacacgggagcaggtcagggttgctctgggtaa aagcctgtgagcctaagagctaatcctgtacatggctcctttacctacacactggggatt tgacctctatctccactctcattaatatgggtggcctatttgctcttattaaaaggaaag ggggagatgttgggagccgcccccacattcgccgtcacaagatggcgctgacatcctgtg ttctaagtggtaaacaaataatctgcgcatgagccaagggtattttatgactacttgtac tctacctttcccgtgaacgtcagctcggccatgggctgcagccaatcagggagtgatgcg tcctaggcgaaatataactctcctaaagagggaaggggtttcggtttcattattgaaggg gctttcgtttttggggctgggcgctgggcgcttgccctcctggctcccaaagatgtaagc aataaagttttgccgcagaagattctggtctgttgcgtctttcctggccgggcgtgagaa cgcgtctaataagagtgggggaaggcatcccaaaataaaatcaattttaaaatgtttgtt ctagttttagataatagcattaaatgagaatttctaaggttgatataaacatactacaga ataagaaaataaaaatttgttacaagaagtagtgctaagtctgagtctaagtcttttaca ggtgatggcccagctgcagtgcaagatttgaagatatgcgtttcagaaagtccattaaga agtgcagccggaggaggagggggggaggggggaggaggaggaggaggaggaggaagggga ggaggaagaggaggaggaggaggagcagtagcagctggtcattactgtaccaacatctca tcctagcacttaggaggtggtcaggttgatctctgtgagttccaggtcagcctagtgtat gtgaggagaccctctttatgaaaaaaaaaaatgtaaaaactctaagagtataatgaaatt gaaaattctaactattcatcatgaccttcagaaagagaacattcatgtcttttaaaaaca tttctaaaatattgactaattttaagccaccagggaagttctatagatttcagggaatta gcattaatgtataagtgtttgtaaccaaaagcaattataacatttaaaatggattgcaaa gtcaaaattaattgttcagggaagcctcatgtagcctaggttggccttagattcctgatt ctcctaccttaacttcccaagtgctaggattaaaaactaattttcagataagaaatgaat tacagagaaaatttgtaacctgaggaagtaaggaagtcttgagctgtactgtaaagcaat attgagaaagaaatttctgtccttatatgcatgtgtatgagacaaaaaagaagaagagga ggaggaggggagggagggagggggagaaaggggaaggaaggagaagaagaagaagaagaa gaagaaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaagaaga agaagaagaagaataagaggaggaagaagaggaggaagaagcagcagcagcagcagctac attttccactgaagagtctagagaaaggactttgagaaagtccacagaagattttaaaat ggaacaaataataacgatacaagtaaatttttaacatagaaaaatgcaggtactgactgc atttaaagattgttcatagaaagaaataatagaagaactattcacacagttacagggaca gagaaagaggctgcagacacagagggcacaaacaaaaaattcagaagcagtctgcattcc cttcctgtaaagagcactagactgagatagctcaaaccccatgtgttcactttaagtaag atatggcccgtggttttccctgtgtccttttacatacagtgtctaaaaagaataaagcat tcacatgtcacattagccagggagctagaggagagctttagactgatgccttttgttgtt gtttgcttctttgtttgttttccattaatttatttattcactatataatccaatcacaga ccccccctccttcccatgtctcccttacagagccccctcccccaataccagctcatcctg gtacatcaagtcactgccagcctaggcactccctccccccttgaggcaatagagtcagga acagccccagatccagttattggaggacttgcaacaaggccaagttgcacatctgctaca tacgtaggggtgaaaggggatctatgtccagcccgtgcttgctcatgcagacagatccca cttttactgccatacttctccaaactcccctgaaatataaggaaagagaagttttaagtt tttaacacaaatgtaaaggaaacacaaacaaacaataaaaccaaagaaaacaaacacaca aaacagcagaaaaaaacagcaaaccgaaatctaggcgaccccgttcctggtttactactt ggcacacaactagcttccctgtgatcccgttcctggtttactaacttggcacacaactag tctctctgtgcgctctctgggaacttgaggagatgagactggcacttggcaatcacagta tgtctgaaggctcttgtgcagcatagaaggtgaccgtactgatccattcccctgcgtaaa aaaaaaaaaaaaaatgtcatttgatgtggactgtgtttgggtggattactatagcaacat actttgaggggtgtggcttcaagaacagccatatgcttctcaccattctggaggtgaagt tcaagactagagtgctggctagttccaagttcatttgtcctaacaaagatcaacttcctg tcttcttactgagttgtcagttggctgagagatgacactaatcccaggagaaggactcca gcctcagagcctcatctaaatataaccacttccaaatatcagcacattgtggagagaatt tcaacatatgaaatttgggggacacaaatatttagtttataaaatgagtttcccagaatg agaacaagagaacaaatataatttatcgtcttctgattttaattaagttcAGAAGACCTC AAACCCAAATPrimer
|
For commercial licensing of the VISTA Enhancer Browser and its associated data please contact Virginia de la Puente (vtdelapuente@lbl.gov) at the Berkeley Lab's Innovation and Partnerships Office.